Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CLDN9O95484 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN9O95484 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN9O95484 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN9O95484 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN9O95484 WWOX-216ENST00000569818 525 ntBASIC17.83■□□□□ 0.44
CLDN9O95484 CR769767.2-201ENST00000622735 460 ntBASIC17.83■□□□□ 0.44
CLDN9O95484 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN9O95484 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN9O95484 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN9O95484 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLDN9O95484 GMCL1P1-201ENST00000463439 1581 ntBASIC17.83■□□□□ 0.44
CLDN9O95484 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLDN9O95484 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN9O95484 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN9O95484 AL163051.1-201ENST00000569214 1512 ntBASIC17.82■□□□□ 0.44
CLDN9O95484 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 NOC2LP2-201ENST00000407594 1944 ntBASIC17.82■□□□□ 0.44
CLDN9O95484 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLDN9O95484 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.82■□□□□ 0.44
CLDN9O95484 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 KRT18P23-201ENST00000435622 1283 ntBASIC17.82■□□□□ 0.44
CLDN9O95484 AC007663.1-201ENST00000438948 1240 ntBASIC17.82■□□□□ 0.44
CLDN9O95484 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN9O95484 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN9O95484 MIR4497-201ENST00000583208 89 ntBASIC17.82■□□□□ 0.44
CLDN9O95484 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN9O95484 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN9O95484 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN9O95484 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN9O95484 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN9O95484 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CLDN9O95484 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN9O95484 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDN9O95484 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN9O95484 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN9O95484 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDN9O95484 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN9O95484 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN9O95484 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN9O95484 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN9O95484 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLDN9O95484 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN9O95484 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN9O95484 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN9O95484 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN9O95484 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN9O95484 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN9O95484 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN9O95484 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
CLDN9O95484 AL133373.2-201ENST00000623187 2828 ntBASIC17.8■□□□□ 0.44
CLDN9O95484 TSPY14P-201ENST00000303979 915 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms