Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.53■□□□□ 0.56
VAPBO95292 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VAPBO95292 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
VAPBO95292 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
VAPBO95292 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
VAPBO95292 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.52■□□□□ 0.56
VAPBO95292 TSPY15P-201ENST00000457163 923 ntBASIC18.52■□□□□ 0.56
VAPBO95292 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.52■□□□□ 0.56
VAPBO95292 C2orf69P3-201ENST00000565542 1120 ntBASIC18.52■□□□□ 0.56
VAPBO95292 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.52■□□□□ 0.56
VAPBO95292 AC116562.4-202ENST00000641738 218 ntBASIC18.52■□□□□ 0.56
VAPBO95292 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.52■□□□□ 0.56
VAPBO95292 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VAPBO95292 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.52■□□□□ 0.55
VAPBO95292 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
VAPBO95292 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VAPBO95292 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.52■□□□□ 0.55
VAPBO95292 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
VAPBO95292 AC093677.2-201ENST00000600169 1863 ntBASIC18.52■□□□□ 0.55
VAPBO95292 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.52■□□□□ 0.55
VAPBO95292 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
VAPBO95292 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPBO95292 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
VAPBO95292 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 AC007663.1-201ENST00000438948 1240 ntBASIC18.51■□□□□ 0.55
VAPBO95292 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.51■□□□□ 0.55
VAPBO95292 BX088651.1-201ENST00000540551 451 ntBASIC18.51■□□□□ 0.55
VAPBO95292 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.51■□□□□ 0.55
VAPBO95292 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VAPBO95292 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.51■□□□□ 0.55
VAPBO95292 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPBO95292 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPBO95292 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPBO95292 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPBO95292 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.5■□□□□ 0.55
VAPBO95292 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.5■□□□□ 0.55
VAPBO95292 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.5■□□□□ 0.55
VAPBO95292 CR769767.2-201ENST00000622735 460 ntBASIC18.5■□□□□ 0.55
VAPBO95292 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPBO95292 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPBO95292 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.49■□□□□ 0.55
VAPBO95292 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.49■□□□□ 0.55
VAPBO95292 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 LTB4R2-202ENST00000528054 3092 ntBASIC18.49■□□□□ 0.55
VAPBO95292 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VAPBO95292 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms