Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLSTN1O94985 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.39■□□□□ 0.85
CLSTN1O94985 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 AP005242.2-201ENST00000580065 1175 ntBASIC20.39■□□□□ 0.85
CLSTN1O94985 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
CLSTN1O94985 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.39■□□□□ 0.85
CLSTN1O94985 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLSTN1O94985 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CLSTN1O94985 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLSTN1O94985 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.39■□□□□ 0.85
CLSTN1O94985 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.39■□□□□ 0.85
CLSTN1O94985 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLSTN1O94985 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 AC135050.7-201ENST00000624508 2218 ntBASIC20.38■□□□□ 0.85
CLSTN1O94985 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLSTN1O94985 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 KRT8P9-201ENST00000558927 1449 ntBASIC20.38■□□□□ 0.85
CLSTN1O94985 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLSTN1O94985 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.38■□□□□ 0.85
CLSTN1O94985 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 AC133561.5-201ENST00000635547 218 ntBASIC20.38■□□□□ 0.85
CLSTN1O94985 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLSTN1O94985 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.38■□□□□ 0.85
CLSTN1O94985 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLSTN1O94985 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.37■□□□□ 0.85
CLSTN1O94985 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLSTN1O94985 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLSTN1O94985 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.37■□□□□ 0.85
CLSTN1O94985 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 CCR12P-201ENST00000446203 998 ntBASIC20.37■□□□□ 0.85
CLSTN1O94985 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.37■□□□□ 0.85
CLSTN1O94985 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CLSTN1O94985 AC073912.3-201ENST00000624414 853 ntBASIC20.37■□□□□ 0.85
CLSTN1O94985 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLSTN1O94985 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLSTN1O94985 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CLSTN1O94985 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLSTN1O94985 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.36■□□□□ 0.85
CLSTN1O94985 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.36■□□□□ 0.85
CLSTN1O94985 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.36■□□□□ 0.85
CLSTN1O94985 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.36■□□□□ 0.85
CLSTN1O94985 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
CLSTN1O94985 AC087499.1-201ENST00000418141 1075 ntBASIC20.36■□□□□ 0.85
CLSTN1O94985 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.36■□□□□ 0.85
CLSTN1O94985 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.36■□□□□ 0.85
CLSTN1O94985 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLSTN1O94985 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.36■□□□□ 0.85
CLSTN1O94985 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLSTN1O94985 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLSTN1O94985 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms