Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.47■□□□□ 0.55
GPC4O75487 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
GPC4O75487 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.47■□□□□ 0.55
GPC4O75487 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.47■□□□□ 0.55
GPC4O75487 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 AC092338.2-201ENST00000568827 1415 ntBASIC18.47■□□□□ 0.55
GPC4O75487 HEIH-201ENST00000623091 1652 ntBASIC18.47■□□□□ 0.55
GPC4O75487 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GPC4O75487 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC4O75487 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC4O75487 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GPC4O75487 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
GPC4O75487 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC4O75487 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC4O75487 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.46■□□□□ 0.55
GPC4O75487 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
GPC4O75487 TSPY17P-201ENST00000450329 467 ntBASIC18.46■□□□□ 0.55
GPC4O75487 EGLN1P1-201ENST00000531623 762 ntBASIC18.46■□□□□ 0.55
GPC4O75487 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.46■□□□□ 0.55
GPC4O75487 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC4O75487 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC4O75487 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC4O75487 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC4O75487 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC4O75487 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
GPC4O75487 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
GPC4O75487 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GPC4O75487 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC4O75487 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GPC4O75487 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC4O75487 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC4O75487 CCR12P-201ENST00000446203 998 ntBASIC18.45■□□□□ 0.54
GPC4O75487 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC4O75487 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC4O75487 NAPSB-206ENST00000562112 1266 ntBASIC18.45■□□□□ 0.54
GPC4O75487 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 ANO7L1-203ENST00000602586 1720 ntBASIC18.45■□□□□ 0.54
GPC4O75487 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
GPC4O75487 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC4O75487 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC4O75487 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 AL354751.1-201ENST00000412768 1863 ntBASIC18.44■□□□□ 0.54
GPC4O75487 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.44■□□□□ 0.54
GPC4O75487 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
GPC4O75487 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.44■□□□□ 0.54
GPC4O75487 AC007663.1-201ENST00000438948 1240 ntBASIC18.44■□□□□ 0.54
GPC4O75487 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.44■□□□□ 0.54
GPC4O75487 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.44■□□□□ 0.54
GPC4O75487 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 AC116562.4-202ENST00000641738 218 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms