Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PMPCBO75439 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.71■□□□□ 0.59
PMPCBO75439 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 AC007613.1-201ENST00000572811 2597 ntBASIC18.71■□□□□ 0.59
PMPCBO75439 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
PMPCBO75439 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PMPCBO75439 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PMPCBO75439 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PMPCBO75439 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PMPCBO75439 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.71■□□□□ 0.59
PMPCBO75439 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PMPCBO75439 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.71■□□□□ 0.59
PMPCBO75439 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PMPCBO75439 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PMPCBO75439 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMPCBO75439 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PMPCBO75439 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.71■□□□□ 0.58
PMPCBO75439 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PMPCBO75439 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PMPCBO75439 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PMPCBO75439 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
PMPCBO75439 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
PMPCBO75439 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PMPCBO75439 AC211429.1-201ENST00000415277 523 ntBASIC18.7■□□□□ 0.58
PMPCBO75439 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PMPCBO75439 ECEL1P3-201ENST00000427961 737 ntBASIC18.7■□□□□ 0.58
PMPCBO75439 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
PMPCBO75439 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.7■□□□□ 0.58
PMPCBO75439 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.7■□□□□ 0.58
PMPCBO75439 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.7■□□□□ 0.58
PMPCBO75439 KRT8P7-201ENST00000533003 1432 ntBASIC18.7■□□□□ 0.58
PMPCBO75439 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.7■□□□□ 0.58
PMPCBO75439 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.7■□□□□ 0.58
PMPCBO75439 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PMPCBO75439 AC024243.1-201ENST00000609234 778 ntBASIC18.7■□□□□ 0.58
PMPCBO75439 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PMPCBO75439 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 AC135050.7-201ENST00000624508 2218 ntBASIC18.7■□□□□ 0.58
PMPCBO75439 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.7■□□□□ 0.58
PMPCBO75439 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PMPCBO75439 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMPCBO75439 AL163051.1-201ENST00000569214 1512 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PMPCBO75439 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PMPCBO75439 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PMPCBO75439 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.69■□□□□ 0.58
PMPCBO75439 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PMPCBO75439 LIN28AP1-201ENST00000429574 405 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.69■□□□□ 0.58
PMPCBO75439 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.69■□□□□ 0.58
PMPCBO75439 AC010203.1-204ENST00000548782 407 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.69■□□□□ 0.58
PMPCBO75439 AC012306.2-201ENST00000609350 630 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PMPCBO75439 AC097493.4-201ENST00000641197 219 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.69■□□□□ 0.58
PMPCBO75439 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PMPCBO75439 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 BICD1-207ENST00000551848 1962 ntBASIC18.69■□□□□ 0.58
PMPCBO75439 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PMPCBO75439 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PMPCBO75439 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMPCBO75439 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms