Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM3O75382 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM3O75382 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM3O75382 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.17■□□□□ 0.34
TRIM3O75382 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM3O75382 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
TRIM3O75382 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 COX11P1-201ENST00000489116 835 ntBASIC17.17■□□□□ 0.34
TRIM3O75382 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM3O75382 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
TRIM3O75382 AC139887.4-201ENST00000607877 719 ntBASIC17.17■□□□□ 0.34
TRIM3O75382 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 CR769767.2-201ENST00000622735 460 ntBASIC17.17■□□□□ 0.34
TRIM3O75382 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM3O75382 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM3O75382 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM3O75382 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM3O75382 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.17■□□□□ 0.34
TRIM3O75382 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM3O75382 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM3O75382 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM3O75382 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 AK4P3-201ENST00000418260 669 ntBASIC17.16■□□□□ 0.34
TRIM3O75382 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM3O75382 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM3O75382 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM3O75382 WWOX-216ENST00000569818 525 ntBASIC17.16■□□□□ 0.34
TRIM3O75382 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM3O75382 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM3O75382 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM3O75382 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM3O75382 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM3O75382 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM3O75382 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRIM3O75382 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 AL512353.2-201ENST00000448759 1962 ntBASIC17.15■□□□□ 0.34
TRIM3O75382 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TRIM3O75382 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms