Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF253O75346 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF253O75346 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF253O75346 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF253O75346 MYC-208ENST00000641036 567 ntBASIC14.36□□□□□ -0.11
ZNF253O75346 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
ZNF253O75346 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF253O75346 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF253O75346 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF253O75346 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF253O75346 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 PCDHA12-202ENST00000613593 2588 ntBASIC14.35□□□□□ -0.11
ZNF253O75346 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF253O75346 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
ZNF253O75346 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF253O75346 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF253O75346 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF253O75346 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF253O75346 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 NBPF21P-201ENST00000425093 1451 ntBASIC14.35□□□□□ -0.11
ZNF253O75346 HEIH-201ENST00000623091 1652 ntBASIC14.35□□□□□ -0.11
ZNF253O75346 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ZNF253O75346 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF253O75346 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ZNF253O75346 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
ZNF253O75346 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ZNF253O75346 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 AC069152.1-201ENST00000438030 544 ntBASIC14.34□□□□□ -0.11
ZNF253O75346 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF253O75346 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF253O75346 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF253O75346 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF253O75346 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms