Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FSCN1P1-201ENST00000568912 1481 ntBASIC16.32■□□□□ 0.2
GMDSO60547 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GMDSO60547 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.32■□□□□ 0.2
GMDSO60547 AL049637.2-201ENST00000641778 930 ntBASIC16.32■□□□□ 0.2
GMDSO60547 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
GMDSO60547 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GMDSO60547 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GMDSO60547 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
GMDSO60547 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.32■□□□□ 0.2
GMDSO60547 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GMDSO60547 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.32■□□□□ 0.2
GMDSO60547 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GMDSO60547 RCC2P6-201ENST00000526625 1557 ntBASIC16.31■□□□□ 0.2
GMDSO60547 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 FAM197Y1-201ENST00000421178 764 ntBASIC16.31■□□□□ 0.2
GMDSO60547 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.31■□□□□ 0.2
GMDSO60547 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.31■□□□□ 0.2
GMDSO60547 AC008550.1-201ENST00000511500 884 ntBASIC16.31■□□□□ 0.2
GMDSO60547 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.31■□□□□ 0.2
GMDSO60547 AC083906.6-201ENST00000641366 219 ntBASIC16.31■□□□□ 0.2
GMDSO60547 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
GMDSO60547 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.31■□□□□ 0.2
GMDSO60547 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
GMDSO60547 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GMDSO60547 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GMDSO60547 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GMDSO60547 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GMDSO60547 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.3■□□□□ 0.2
GMDSO60547 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
GMDSO60547 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
GMDSO60547 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.3■□□□□ 0.2
GMDSO60547 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.3■□□□□ 0.2
GMDSO60547 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 PRSS44-201ENST00000515154 1146 ntBASIC16.3■□□□□ 0.2
GMDSO60547 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
GMDSO60547 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.3■□□□□ 0.2
GMDSO60547 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.3■□□□□ 0.2
GMDSO60547 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.3■□□□□ 0.2
GMDSO60547 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GMDSO60547 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GMDSO60547 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.3■□□□□ 0.2
GMDSO60547 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.29■□□□□ 0.2
GMDSO60547 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.29■□□□□ 0.2
GMDSO60547 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 AC009053.2-201ENST00000563701 2365 ntBASIC16.29■□□□□ 0.2
GMDSO60547 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.29■□□□□ 0.2
GMDSO60547 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.29■□□□□ 0.2
GMDSO60547 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GMDSO60547 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.29■□□□□ 0.2
GMDSO60547 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.29■□□□□ 0.2
GMDSO60547 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.29■□□□□ 0.2
GMDSO60547 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.29■□□□□ 0.2
GMDSO60547 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GMDSO60547 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.29■□□□□ 0.2
GMDSO60547 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.29■□□□□ 0.2
GMDSO60547 Z99916.2-201ENST00000604037 246 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms