Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LCMT2O60294 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LCMT2O60294 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LCMT2O60294 AC009102.3-201ENST00000623118 1491 ntBASIC17.62■□□□□ 0.41
LCMT2O60294 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LCMT2O60294 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.62■□□□□ 0.41
LCMT2O60294 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LCMT2O60294 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LCMT2O60294 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
LCMT2O60294 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.61■□□□□ 0.41
LCMT2O60294 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 STARP1-201ENST00000397973 869 ntBASIC17.61■□□□□ 0.41
LCMT2O60294 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
LCMT2O60294 AC079602.3-201ENST00000623931 403 ntBASIC17.61■□□□□ 0.41
LCMT2O60294 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LCMT2O60294 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LCMT2O60294 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LCMT2O60294 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 NEFHP1-201ENST00000412845 2629 ntBASIC17.6■□□□□ 0.41
LCMT2O60294 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LCMT2O60294 AL359075.1-203ENST00000462729 1002 ntBASIC17.6■□□□□ 0.41
LCMT2O60294 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LCMT2O60294 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LCMT2O60294 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
LCMT2O60294 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LCMT2O60294 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.59■□□□□ 0.41
LCMT2O60294 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 ESPNP-201ENST00000270691 2015 ntBASIC17.59■□□□□ 0.41
LCMT2O60294 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.59■□□□□ 0.41
LCMT2O60294 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.59■□□□□ 0.41
LCMT2O60294 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 AC034232.1-201ENST00000506026 1064 ntBASIC17.59■□□□□ 0.41
LCMT2O60294 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.59■□□□□ 0.41
LCMT2O60294 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LCMT2O60294 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.59■□□□□ 0.41
LCMT2O60294 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms