Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PEX1O43933 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PEX1O43933 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
PEX1O43933 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.97■□□□□ 0.47
PEX1O43933 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PEX1O43933 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.97■□□□□ 0.47
PEX1O43933 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.97■□□□□ 0.47
PEX1O43933 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.97■□□□□ 0.47
PEX1O43933 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.97■□□□□ 0.47
PEX1O43933 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.97■□□□□ 0.47
PEX1O43933 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PEX1O43933 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.97■□□□□ 0.47
PEX1O43933 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PEX1O43933 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.97■□□□□ 0.47
PEX1O43933 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PEX1O43933 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.97■□□□□ 0.47
PEX1O43933 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PEX1O43933 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PEX1O43933 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 AC211429.1-201ENST00000415277 523 ntBASIC17.96■□□□□ 0.47
PEX1O43933 ECEL1P3-201ENST00000427961 737 ntBASIC17.96■□□□□ 0.47
PEX1O43933 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 AC083906.6-201ENST00000641366 219 ntBASIC17.96■□□□□ 0.47
PEX1O43933 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PEX1O43933 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.96■□□□□ 0.47
PEX1O43933 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
PEX1O43933 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PEX1O43933 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PEX1O43933 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PEX1O43933 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PEX1O43933 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PEX1O43933 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PEX1O43933 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.95■□□□□ 0.46
PEX1O43933 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 YBX1P10-201ENST00000444752 975 ntBASIC17.95■□□□□ 0.46
PEX1O43933 KSR1P1-201ENST00000446298 240 ntBASIC17.95■□□□□ 0.46
PEX1O43933 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.95■□□□□ 0.46
PEX1O43933 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.95■□□□□ 0.46
PEX1O43933 CR392000.1-201ENST00000624770 1228 ntBASIC17.95■□□□□ 0.46
PEX1O43933 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.95■□□□□ 0.46
PEX1O43933 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
PEX1O43933 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms