Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLOCKO15516 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.5■□□□□ 0.39
CLOCKO15516 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.5■□□□□ 0.39
CLOCKO15516 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.5■□□□□ 0.39
CLOCKO15516 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.5■□□□□ 0.39
CLOCKO15516 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.5■□□□□ 0.39
CLOCKO15516 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.5■□□□□ 0.39
CLOCKO15516 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.5■□□□□ 0.39
CLOCKO15516 AC120498.8-201ENST00000614275 531 ntBASIC17.5■□□□□ 0.39
CLOCKO15516 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.5■□□□□ 0.39
CLOCKO15516 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.5■□□□□ 0.39
CLOCKO15516 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CLOCKO15516 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.5■□□□□ 0.39
CLOCKO15516 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLOCKO15516 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
CLOCKO15516 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLOCKO15516 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLOCKO15516 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CLOCKO15516 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.49■□□□□ 0.39
CLOCKO15516 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLOCKO15516 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLOCKO15516 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.49■□□□□ 0.39
CLOCKO15516 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.49■□□□□ 0.39
CLOCKO15516 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.49■□□□□ 0.39
CLOCKO15516 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.49■□□□□ 0.39
CLOCKO15516 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.49■□□□□ 0.39
CLOCKO15516 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLOCKO15516 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.49■□□□□ 0.39
CLOCKO15516 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.49■□□□□ 0.39
CLOCKO15516 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLOCKO15516 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLOCKO15516 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.48■□□□□ 0.39
CLOCKO15516 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLOCKO15516 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.48■□□□□ 0.39
CLOCKO15516 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.48■□□□□ 0.39
CLOCKO15516 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.48■□□□□ 0.39
CLOCKO15516 AC138028.4-201ENST00000564984 1845 ntBASIC17.48■□□□□ 0.39
CLOCKO15516 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.48■□□□□ 0.39
CLOCKO15516 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLOCKO15516 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CLOCKO15516 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.48■□□□□ 0.39
CLOCKO15516 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms