Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.49■□□□□ 0.39
UPK1AO00322 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1AO00322 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.49■□□□□ 0.39
UPK1AO00322 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPK1AO00322 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1AO00322 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPK1AO00322 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UPK1AO00322 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.48■□□□□ 0.39
UPK1AO00322 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK1AO00322 GNAS-203ENST00000306120 1878 ntBASIC17.48■□□□□ 0.39
UPK1AO00322 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UPK1AO00322 PRORSD1P-202ENST00000563365 2154 ntBASIC17.48■□□□□ 0.39
UPK1AO00322 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.48■□□□□ 0.39
UPK1AO00322 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.48■□□□□ 0.39
UPK1AO00322 MIR1238-201ENST00000408483 83 ntBASIC17.48■□□□□ 0.39
UPK1AO00322 AC093827.2-201ENST00000512654 315 ntBASIC17.48■□□□□ 0.39
UPK1AO00322 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.48■□□□□ 0.39
UPK1AO00322 AC066615.1-201ENST00000640911 628 ntBASIC17.48■□□□□ 0.39
UPK1AO00322 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UPK1AO00322 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UPK1AO00322 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.48■□□□□ 0.39
UPK1AO00322 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.48■□□□□ 0.39
UPK1AO00322 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1AO00322 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UPK1AO00322 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
UPK1AO00322 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
UPK1AO00322 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 AC012313.1-201ENST00000593393 3059 ntBASIC17.47■□□□□ 0.39
UPK1AO00322 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPK1AO00322 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPK1AO00322 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPK1AO00322 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 SLC25A1P2-201ENST00000430693 912 ntBASIC17.47■□□□□ 0.39
UPK1AO00322 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.47■□□□□ 0.39
UPK1AO00322 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.47■□□□□ 0.39
UPK1AO00322 AL023803.3-201ENST00000615559 522 ntBASIC17.47■□□□□ 0.39
UPK1AO00322 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.47■□□□□ 0.39
UPK1AO00322 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPK1AO00322 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.47■□□□□ 0.39
UPK1AO00322 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1AO00322 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1AO00322 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1AO00322 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.46■□□□□ 0.39
UPK1AO00322 AL596275.1-201ENST00000423464 877 ntBASIC17.46■□□□□ 0.39
UPK1AO00322 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1AO00322 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1AO00322 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UPK1AO00322 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.46■□□□□ 0.39
UPK1AO00322 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
UPK1AO00322 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UPK1AO00322 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
UPK1AO00322 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
UPK1AO00322 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.46■□□□□ 0.39
UPK1AO00322 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1AO00322 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.46■□□□□ 0.39
UPK1AO00322 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms