Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
DDX39AO00148 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DDX39AO00148 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX39AO00148 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.69■□□□□ 0.9
DDX39AO00148 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
DDX39AO00148 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX39AO00148 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX39AO00148 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX39AO00148 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX39AO00148 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 AC126763.1-201ENST00000552015 2118 ntBASIC20.69■□□□□ 0.9
DDX39AO00148 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DDX39AO00148 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 AC009102.3-201ENST00000623118 1491 ntBASIC20.69■□□□□ 0.9
DDX39AO00148 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DDX39AO00148 AC018445.3-201ENST00000624177 1945 ntBASIC20.68■□□□□ 0.9
DDX39AO00148 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 AC093525.10-201ENST00000625130 1569 ntBASIC20.68■□□□□ 0.9
DDX39AO00148 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
DDX39AO00148 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DDX39AO00148 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
DDX39AO00148 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX39AO00148 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 AL031598.1-201ENST00000561511 1773 ntBASIC20.68■□□□□ 0.9
DDX39AO00148 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX39AO00148 MIR149-201ENST00000384879 89 ntBASIC20.68■□□□□ 0.9
DDX39AO00148 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
DDX39AO00148 AP003733.1-201ENST00000491725 852 ntBASIC20.68■□□□□ 0.9
DDX39AO00148 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX39AO00148 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX39AO00148 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX39AO00148 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DDX39AO00148 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DDX39AO00148 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DDX39AO00148 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX39AO00148 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
DDX39AO00148 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX39AO00148 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 KRT18P48-201ENST00000434763 852 ntBASIC20.67■□□□□ 0.9
DDX39AO00148 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.67■□□□□ 0.9
DDX39AO00148 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.67■□□□□ 0.9
DDX39AO00148 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
DDX39AO00148 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX39AO00148 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DDX39AO00148 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DDX39AO00148 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX39AO00148 Z83836.1-201ENST00000624605 1642 ntBASIC20.67■□□□□ 0.9
DDX39AO00148 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
DDX39AO00148 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX39AO00148 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 TSPY22P-201ENST00000427496 604 ntBASIC20.66■□□□□ 0.9
DDX39AO00148 HCG4P8-203ENST00000443049 980 ntBASIC20.66■□□□□ 0.9
DDX39AO00148 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DDX39AO00148 BX276092.5-203ENST00000456199 560 ntBASIC20.66■□□□□ 0.9
DDX39AO00148 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX39AO00148 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX39AO00148 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 AC024563.2-201ENST00000603282 481 ntBASIC20.66■□□□□ 0.9
DDX39AO00148 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DDX39AO00148 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX39AO00148 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX39AO00148 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms