Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GMCL1P1-201ENST00000463439 1581 ntBASIC19.87■□□□□ 0.77
LRRC53A6NM62 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 CA15P1-201ENST00000481698 905 ntBASIC19.87■□□□□ 0.77
LRRC53A6NM62 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC53A6NM62 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC53A6NM62 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 PHGDH-209ENST00000641074 1780 ntBASIC19.86■□□□□ 0.77
LRRC53A6NM62 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 CRYGFP-201ENST00000418459 633 ntBASIC19.86■□□□□ 0.77
LRRC53A6NM62 GCSHP5-201ENST00000443090 522 ntBASIC19.86■□□□□ 0.77
LRRC53A6NM62 AL158047.1-201ENST00000445918 881 ntBASIC19.86■□□□□ 0.77
LRRC53A6NM62 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 MIR3180-5-201ENST00000583743 153 ntBASIC19.86■□□□□ 0.77
LRRC53A6NM62 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 AC036111.1-201ENST00000533973 1582 ntBASIC19.86■□□□□ 0.77
LRRC53A6NM62 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC53A6NM62 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRRC53A6NM62 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 AC233702.5-201ENST00000584107 538 ntBASIC19.85■□□□□ 0.77
LRRC53A6NM62 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 AL049637.2-201ENST00000641778 930 ntBASIC19.85■□□□□ 0.77
LRRC53A6NM62 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC53A6NM62 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC53A6NM62 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 GNAS-203ENST00000306120 1878 ntBASIC19.84■□□□□ 0.77
LRRC53A6NM62 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC53A6NM62 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC53A6NM62 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC53A6NM62 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC53A6NM62 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 AC012618.2-201ENST00000428058 849 ntBASIC19.84■□□□□ 0.77
LRRC53A6NM62 UBE2SP1-201ENST00000450587 669 ntBASIC19.84■□□□□ 0.77
LRRC53A6NM62 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 FLJ13224-201ENST00000313737 1514 ntBASIC19.84■□□□□ 0.77
LRRC53A6NM62 SDHAP2-201ENST00000455183 2001 ntBASIC19.84■□□□□ 0.77
LRRC53A6NM62 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC53A6NM62 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms