Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.34□□□□□ -0.11
FAM223BA6NKX1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM223BA6NKX1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 HTR7P1-202ENST00000624664 4411 ntBASIC14.33□□□□□ -0.12
FAM223BA6NKX1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 AC005521.1-201ENST00000393351 872 ntBASIC14.33□□□□□ -0.12
FAM223BA6NKX1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 MIR3917-201ENST00000580971 93 ntBASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 GMCL1P1-201ENST00000463439 1581 ntBASIC14.33□□□□□ -0.12
FAM223BA6NKX1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
FAM223BA6NKX1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.32□□□□□ -0.12
FAM223BA6NKX1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 OR6D1P-202ENST00000641007 5290 ntBASIC14.32□□□□□ -0.12
FAM223BA6NKX1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM223BA6NKX1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM223BA6NKX1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms