Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D3FA6NER0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 AL845331.1-201ENST00000424978 1190 ntBASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 AC104819.1-201ENST00000504587 486 ntBASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3FA6NER0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 FOSL1P1-201ENST00000511041 816 ntBASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 AC074051.2-201ENST00000565115 352 ntBASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 KRT89P-201ENST00000620027 1478 ntBASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TBC1D3FA6NER0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 AC004870.1-201ENST00000315132 882 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 UNC93B7-201ENST00000509439 705 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 AC091304.2-201ENST00000564639 760 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 LINC01711-201ENST00000598340 967 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 Z69720.1-201ENST00000601483 472 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 AL121772.3-201ENST00000610840 674 ntBASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TBC1D3FA6NER0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 MIR149-201ENST00000384879 89 ntBASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 AL732292.2-201ENST00000609649 430 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms