Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 TSPY12P-201ENST00000421279 868 ntBASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.15■□□□□ 0.18
MBD3L4A6NDZ8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.14■□□□□ 0.18
MBD3L4A6NDZ8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 ANO7L1-203ENST00000602586 1720 ntBASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 EMBP1-201ENST00000458200 901 ntBASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 AC091607.1-201ENST00000490318 1060 ntBASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MBD3L4A6NDZ8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L4A6NDZ8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 POM121L3P-201ENST00000419331 1163 ntBASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 KRT16P4-201ENST00000453883 522 ntBASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 MINOS1P3-201ENST00000457048 203 ntBASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 AC009154.2-201ENST00000621177 724 ntBASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 AC099343.3-201ENST00000605834 2503 ntBASIC16.12■□□□□ 0.17
MBD3L4A6NDZ8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.11■□□□□ 0.17
MBD3L4A6NDZ8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L4A6NDZ8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L4A6NDZ8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
MBD3L4A6NDZ8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms