Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00862A6NCI5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00862A6NCI5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00862A6NCI5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 KRT16P2-201ENST00000414673 1423 ntBASIC14.96□□□□□ -0.01
LINC00862A6NCI5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00862A6NCI5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00862A6NCI5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 KRT125P-201ENST00000546827 989 ntBASIC14.95□□□□□ -0.02
LINC00862A6NCI5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LINC00862A6NCI5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 AC010997.5-201ENST00000609182 354 ntBASIC14.94□□□□□ -0.02
LINC00862A6NCI5 AL356652.1-201ENST00000615962 565 ntBASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 FAM45BP-202ENST00000592932 1624 ntBASIC14.94□□□□□ -0.02
LINC00862A6NCI5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms