Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 CRYGFP-201ENST00000418459 633 ntBASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 AC012618.2-201ENST00000428058 849 ntBASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 AC233702.5-201ENST00000584107 538 ntBASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 AL049637.2-201ENST00000641778 930 ntBASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV27A0A087WT01 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TRAV27A0A087WT01 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV27A0A087WT01 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV27A0A087WT01 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV27A0A087WT01 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 FZD10-202ENST00000539839 3282 ntBASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 AC034236.2-201ENST00000606662 1610 ntBASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV27A0A087WT01 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 AL355355.2-201ENST00000442321 338 ntBASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms