Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PCDHAC2Q9Y5I4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.18■■■□□ 2.42
PCDHAC2Q9Y5I4 SMPD5-203ENST00000639008 1464 ntBASIC30.17■■■□□ 2.42
PCDHAC2Q9Y5I4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.17■■■□□ 2.42
PCDHAC2Q9Y5I4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
PCDHAC2Q9Y5I4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
PCDHAC2Q9Y5I4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.16■■■□□ 2.42
PCDHAC2Q9Y5I4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.16■■■□□ 2.42
PCDHAC2Q9Y5I4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.16■■■□□ 2.42
PCDHAC2Q9Y5I4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHAC2Q9Y5I4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.15■■■□□ 2.42
PCDHAC2Q9Y5I4 ABCB10P3-201ENST00000561950 2166 ntBASIC30.15■■■□□ 2.42
PCDHAC2Q9Y5I4 AL139393.2-201ENST00000608721 2025 ntBASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 AC026202.3-201ENST00000600805 1127 ntBASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.14■■■□□ 2.42
PCDHAC2Q9Y5I4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHAC2Q9Y5I4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHAC2Q9Y5I4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHAC2Q9Y5I4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.13■■■□□ 2.41
PCDHAC2Q9Y5I4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.12■■■□□ 2.41
PCDHAC2Q9Y5I4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHAC2Q9Y5I4 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.12■■■□□ 2.41
PCDHAC2Q9Y5I4 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.12■■■□□ 2.41
PCDHAC2Q9Y5I4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHAC2Q9Y5I4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
PCDHAC2Q9Y5I4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHAC2Q9Y5I4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHAC2Q9Y5I4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.1■■■□□ 2.41
PCDHAC2Q9Y5I4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.1■■■□□ 2.41
PCDHAC2Q9Y5I4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
PCDHAC2Q9Y5I4 AC025884.2-201ENST00000553429 711 ntBASIC30.09■■■□□ 2.41
PCDHAC2Q9Y5I4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCDHAC2Q9Y5I4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
PCDHAC2Q9Y5I4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
PCDHAC2Q9Y5I4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHAC2Q9Y5I4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHAC2Q9Y5I4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.07■■■□□ 2.4
PCDHAC2Q9Y5I4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.07■■■□□ 2.4
PCDHAC2Q9Y5I4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHAC2Q9Y5I4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDHAC2Q9Y5I4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.06■■■□□ 2.4
PCDHAC2Q9Y5I4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
PCDHAC2Q9Y5I4 SPCS2P3-201ENST00000500401 656 ntBASIC30.05■■■□□ 2.4
PCDHAC2Q9Y5I4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCDHAC2Q9Y5I4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
PCDHAC2Q9Y5I4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
PCDHAC2Q9Y5I4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCDHAC2Q9Y5I4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
PCDHAC2Q9Y5I4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCDHAC2Q9Y5I4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCDHAC2Q9Y5I4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.03■■■□□ 2.4
PCDHAC2Q9Y5I4 DUX4L9-201ENST00000449051 1259 ntBASIC30.03■■■□□ 2.4
PCDHAC2Q9Y5I4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCDHAC2Q9Y5I4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
PCDHAC2Q9Y5I4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHAC2Q9Y5I4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
PCDHAC2Q9Y5I4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHAC2Q9Y5I4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
PCDHAC2Q9Y5I4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
PCDHAC2Q9Y5I4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PCDHAC2Q9Y5I4 AC093536.1-201ENST00000569153 554 ntBASIC30■■■□□ 2.39
PCDHAC2Q9Y5I4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
PCDHAC2Q9Y5I4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
PCDHAC2Q9Y5I4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCDHAC2Q9Y5I4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.98■■■□□ 2.39
PCDHAC2Q9Y5I4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.98■■■□□ 2.39
PCDHAC2Q9Y5I4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCDHAC2Q9Y5I4 RP9P-202ENST00000450133 1212 ntBASIC29.98■■■□□ 2.39
PCDHAC2Q9Y5I4 RAP2CP1-202ENST00000605179 643 ntBASIC29.98■■■□□ 2.39
PCDHAC2Q9Y5I4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHAC2Q9Y5I4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHAC2Q9Y5I4 AL451085.2-201ENST00000605085 799 ntBASIC29.97■■■□□ 2.39
PCDHAC2Q9Y5I4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHAC2Q9Y5I4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.96■■■□□ 2.39
PCDHAC2Q9Y5I4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.96■■■□□ 2.39
PCDHAC2Q9Y5I4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
PCDHAC2Q9Y5I4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
PCDHAC2Q9Y5I4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
PCDHAC2Q9Y5I4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
PCDHAC2Q9Y5I4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCDHAC2Q9Y5I4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.94■■■□□ 2.38
PCDHAC2Q9Y5I4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PCDHAC2Q9Y5I4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 AC010980.1-201ENST00000587192 1142 ntBASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 ABCB10P1-201ENST00000614297 2181 ntBASIC29.93■■■□□ 2.38
PCDHAC2Q9Y5I4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.92■■■□□ 2.38
PCDHAC2Q9Y5I4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.92■■■□□ 2.38
PCDHAC2Q9Y5I4 AP002414.2-202ENST00000590929 1450 ntBASIC29.92■■■□□ 2.38
PCDHAC2Q9Y5I4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.92■■■□□ 2.38
PCDHAC2Q9Y5I4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms