Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DUX4L13-201ENST00000554103 1267 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L15-201ENST00000611059 1267 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L23-201ENST00000615195 1269 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L24-201ENST00000617576 1269 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L22-201ENST00000618238 1269 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L20-201ENST00000619712 1269 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L21-201ENST00000622058 1269 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L10-201ENST00000622460 1267 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L25-201ENST00000624915 1269 ntBASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
PCDHGA11Q9Y5H2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA11Q9Y5H2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L11-201ENST00000611504 1267 ntBASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L12-201ENST00000614593 1267 ntBASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 DUX4L14-201ENST00000621227 1267 ntBASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA11Q9Y5H2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGA11Q9Y5H2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHGA11Q9Y5H2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA11Q9Y5H2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA11Q9Y5H2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA11Q9Y5H2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA11Q9Y5H2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PCDHGA11Q9Y5H2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 ABHD17AP4-201ENST00000411545 909 ntBASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA11Q9Y5H2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHGA11Q9Y5H2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGA11Q9Y5H2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGA11Q9Y5H2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA11Q9Y5H2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGA11Q9Y5H2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA11Q9Y5H2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGA11Q9Y5H2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGA11Q9Y5H2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 AC008813.1-201ENST00000536597 885 ntBASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA11Q9Y5H2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
PCDHGA11Q9Y5H2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.99■■□□□ 1.43
PCDHGA11Q9Y5H2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDHGA11Q9Y5H2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA11Q9Y5H2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHGA11Q9Y5H2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA11Q9Y5H2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA11Q9Y5H2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHGA11Q9Y5H2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGA11Q9Y5H2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGA11Q9Y5H2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA11Q9Y5H2 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA11Q9Y5H2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA11Q9Y5H2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHGA11Q9Y5H2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA11Q9Y5H2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA11Q9Y5H2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA11Q9Y5H2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA11Q9Y5H2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA11Q9Y5H2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHGA11Q9Y5H2 AL449106.1-201ENST00000608517 1980 ntBASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 WHAMMP3-201ENST00000611636 1609 ntBASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms