Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.02■■□□□ 1.92
UBQLN1Q9UMX0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBQLN1Q9UMX0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
UBQLN1Q9UMX0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
UBQLN1Q9UMX0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
UBQLN1Q9UMX0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
UBQLN1Q9UMX0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
UBQLN1Q9UMX0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
UBQLN1Q9UMX0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
UBQLN1Q9UMX0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
UBQLN1Q9UMX0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27■■□□□ 1.91
UBQLN1Q9UMX0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
UBQLN1Q9UMX0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
UBQLN1Q9UMX0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
UBQLN1Q9UMX0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.98■■□□□ 1.91
UBQLN1Q9UMX0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
UBQLN1Q9UMX0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
UBQLN1Q9UMX0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
UBQLN1Q9UMX0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.97■■□□□ 1.91
UBQLN1Q9UMX0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
UBQLN1Q9UMX0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
UBQLN1Q9UMX0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
UBQLN1Q9UMX0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
UBQLN1Q9UMX0 AC092296.2-201ENST00000589470 999 ntBASIC26.95■■□□□ 1.9
UBQLN1Q9UMX0 AL359258.2-201ENST00000564063 1566 ntBASIC26.95■■□□□ 1.9
UBQLN1Q9UMX0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
UBQLN1Q9UMX0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
UBQLN1Q9UMX0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
UBQLN1Q9UMX0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
UBQLN1Q9UMX0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
UBQLN1Q9UMX0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
UBQLN1Q9UMX0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
UBQLN1Q9UMX0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
UBQLN1Q9UMX0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
UBQLN1Q9UMX0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
UBQLN1Q9UMX0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
UBQLN1Q9UMX0 ECEL1P2-201ENST00000461596 1295 ntBASIC26.89■■□□□ 1.9
UBQLN1Q9UMX0 AL157400.5-201ENST00000507624 621 ntBASIC26.89■■□□□ 1.9
UBQLN1Q9UMX0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
UBQLN1Q9UMX0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
UBQLN1Q9UMX0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
UBQLN1Q9UMX0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
UBQLN1Q9UMX0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
UBQLN1Q9UMX0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.88■■□□□ 1.89
UBQLN1Q9UMX0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
UBQLN1Q9UMX0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
UBQLN1Q9UMX0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
UBQLN1Q9UMX0 ABHD17AP5-201ENST00000580133 923 ntBASIC26.86■■□□□ 1.89
UBQLN1Q9UMX0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
UBQLN1Q9UMX0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
UBQLN1Q9UMX0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.85■■□□□ 1.89
UBQLN1Q9UMX0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.84■■□□□ 1.89
UBQLN1Q9UMX0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
UBQLN1Q9UMX0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
UBQLN1Q9UMX0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.84■■□□□ 1.89
UBQLN1Q9UMX0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.84■■□□□ 1.89
UBQLN1Q9UMX0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
UBQLN1Q9UMX0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.83■■□□□ 1.89
UBQLN1Q9UMX0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
UBQLN1Q9UMX0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.83■■□□□ 1.89
UBQLN1Q9UMX0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
UBQLN1Q9UMX0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBQLN1Q9UMX0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
UBQLN1Q9UMX0 LINC01003-201ENST00000564834 1764 ntBASIC26.82■■□□□ 1.88
UBQLN1Q9UMX0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.82■■□□□ 1.88
UBQLN1Q9UMX0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.82■■□□□ 1.88
UBQLN1Q9UMX0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBQLN1Q9UMX0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.81■■□□□ 1.88
UBQLN1Q9UMX0 WHAMMP3-201ENST00000611636 1609 ntBASIC26.79■■□□□ 1.88
UBQLN1Q9UMX0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBQLN1Q9UMX0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.79■■□□□ 1.88
UBQLN1Q9UMX0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBQLN1Q9UMX0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.78■■□□□ 1.88
UBQLN1Q9UMX0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.77■■□□□ 1.88
UBQLN1Q9UMX0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBQLN1Q9UMX0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBQLN1Q9UMX0 AC142086.6-201ENST00000621154 1765 ntBASIC26.77■■□□□ 1.88
UBQLN1Q9UMX0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBQLN1Q9UMX0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.76■■□□□ 1.87
UBQLN1Q9UMX0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBQLN1Q9UMX0 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.76■■□□□ 1.87
UBQLN1Q9UMX0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBQLN1Q9UMX0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBQLN1Q9UMX0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBQLN1Q9UMX0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBQLN1Q9UMX0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.75■■□□□ 1.87
UBQLN1Q9UMX0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBQLN1Q9UMX0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBQLN1Q9UMX0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
UBQLN1Q9UMX0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBQLN1Q9UMX0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
UBQLN1Q9UMX0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
UBQLN1Q9UMX0 BX255925.1-201ENST00000566954 1854 ntBASIC26.73■■□□□ 1.87
UBQLN1Q9UMX0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms