Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC142086.6-201ENST00000621154 1765 ntBASIC21.23■□□□□ 0.99
GCM1Q9NP62 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GCM1Q9NP62 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
GCM1Q9NP62 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
GCM1Q9NP62 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GCM1Q9NP62 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.22■□□□□ 0.99
GCM1Q9NP62 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GCM1Q9NP62 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GCM1Q9NP62 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GCM1Q9NP62 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GCM1Q9NP62 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GCM1Q9NP62 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.21■□□□□ 0.99
GCM1Q9NP62 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.21■□□□□ 0.99
GCM1Q9NP62 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.21■□□□□ 0.99
GCM1Q9NP62 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.21■□□□□ 0.99
GCM1Q9NP62 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.2■□□□□ 0.98
GCM1Q9NP62 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GCM1Q9NP62 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GCM1Q9NP62 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.2■□□□□ 0.98
GCM1Q9NP62 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GCM1Q9NP62 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GCM1Q9NP62 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GCM1Q9NP62 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.19■□□□□ 0.98
GCM1Q9NP62 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GCM1Q9NP62 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GCM1Q9NP62 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
GCM1Q9NP62 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GCM1Q9NP62 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.18■□□□□ 0.98
GCM1Q9NP62 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.18■□□□□ 0.98
GCM1Q9NP62 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GCM1Q9NP62 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
GCM1Q9NP62 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GCM1Q9NP62 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GCM1Q9NP62 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GCM1Q9NP62 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GCM1Q9NP62 LINC01003-201ENST00000564834 1764 ntBASIC21.16■□□□□ 0.98
GCM1Q9NP62 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.16■□□□□ 0.98
GCM1Q9NP62 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GCM1Q9NP62 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.16■□□□□ 0.98
GCM1Q9NP62 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GCM1Q9NP62 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.16■□□□□ 0.98
GCM1Q9NP62 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.16■□□□□ 0.98
GCM1Q9NP62 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GCM1Q9NP62 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GCM1Q9NP62 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.15■□□□□ 0.98
GCM1Q9NP62 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GCM1Q9NP62 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GCM1Q9NP62 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GCM1Q9NP62 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GCM1Q9NP62 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
GCM1Q9NP62 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GCM1Q9NP62 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GCM1Q9NP62 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.13■□□□□ 0.97
GCM1Q9NP62 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
GCM1Q9NP62 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GCM1Q9NP62 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GCM1Q9NP62 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GCM1Q9NP62 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GCM1Q9NP62 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GCM1Q9NP62 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.12■□□□□ 0.97
GCM1Q9NP62 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GCM1Q9NP62 BX255925.1-201ENST00000566954 1854 ntBASIC21.11■□□□□ 0.97
GCM1Q9NP62 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCM1Q9NP62 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCM1Q9NP62 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GCM1Q9NP62 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCM1Q9NP62 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GCM1Q9NP62 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.11■□□□□ 0.97
GCM1Q9NP62 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.11■□□□□ 0.97
GCM1Q9NP62 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.11■□□□□ 0.97
GCM1Q9NP62 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCM1Q9NP62 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCM1Q9NP62 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GCM1Q9NP62 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.1■□□□□ 0.97
GCM1Q9NP62 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCM1Q9NP62 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
GCM1Q9NP62 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GCM1Q9NP62 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GCM1Q9NP62 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCM1Q9NP62 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.09■□□□□ 0.97
GCM1Q9NP62 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCM1Q9NP62 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GCM1Q9NP62 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GCM1Q9NP62 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.08■□□□□ 0.97
GCM1Q9NP62 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GCM1Q9NP62 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
GCM1Q9NP62 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
GCM1Q9NP62 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
GCM1Q9NP62 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
GCM1Q9NP62 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GCM1Q9NP62 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
GCM1Q9NP62 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.07■□□□□ 0.96
GCM1Q9NP62 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.07■□□□□ 0.96
GCM1Q9NP62 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GCM1Q9NP62 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCM1Q9NP62 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.06■□□□□ 0.96
GCM1Q9NP62 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GCM1Q9NP62 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.06■□□□□ 0.96
GCM1Q9NP62 AC126177.7-201ENST00000547904 679 ntBASIC21.06■□□□□ 0.96
GCM1Q9NP62 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 721 ms