Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VRTNQ9H8Y1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
VRTNQ9H8Y1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VRTNQ9H8Y1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.83■■□□□ 1.89
VRTNQ9H8Y1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VRTNQ9H8Y1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
VRTNQ9H8Y1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VRTNQ9H8Y1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
VRTNQ9H8Y1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VRTNQ9H8Y1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
VRTNQ9H8Y1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
VRTNQ9H8Y1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VRTNQ9H8Y1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VRTNQ9H8Y1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
VRTNQ9H8Y1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
VRTNQ9H8Y1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.8■■□□□ 1.88
VRTNQ9H8Y1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
VRTNQ9H8Y1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.79■■□□□ 1.88
VRTNQ9H8Y1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
VRTNQ9H8Y1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.79■■□□□ 1.88
VRTNQ9H8Y1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.79■■□□□ 1.88
VRTNQ9H8Y1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
VRTNQ9H8Y1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VRTNQ9H8Y1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VRTNQ9H8Y1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.77■■□□□ 1.88
VRTNQ9H8Y1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
VRTNQ9H8Y1 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.77■■□□□ 1.88
VRTNQ9H8Y1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
VRTNQ9H8Y1 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.77■■□□□ 1.88
VRTNQ9H8Y1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
VRTNQ9H8Y1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
VRTNQ9H8Y1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.76■■□□□ 1.87
VRTNQ9H8Y1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VRTNQ9H8Y1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VRTNQ9H8Y1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.75■■□□□ 1.87
VRTNQ9H8Y1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.75■■□□□ 1.87
VRTNQ9H8Y1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VRTNQ9H8Y1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.73■■□□□ 1.87
VRTNQ9H8Y1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
VRTNQ9H8Y1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VRTNQ9H8Y1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VRTNQ9H8Y1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VRTNQ9H8Y1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
VRTNQ9H8Y1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
VRTNQ9H8Y1 AC126177.7-201ENST00000547904 679 ntBASIC26.71■■□□□ 1.87
VRTNQ9H8Y1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VRTNQ9H8Y1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
VRTNQ9H8Y1 WHAMMP3-201ENST00000611636 1609 ntBASIC26.7■■□□□ 1.86
VRTNQ9H8Y1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
VRTNQ9H8Y1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
VRTNQ9H8Y1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VRTNQ9H8Y1 AC060814.1-201ENST00000554326 538 ntBASIC26.68■■□□□ 1.86
VRTNQ9H8Y1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
VRTNQ9H8Y1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VRTNQ9H8Y1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
VRTNQ9H8Y1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
VRTNQ9H8Y1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
VRTNQ9H8Y1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VRTNQ9H8Y1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VRTNQ9H8Y1 AL359258.2-201ENST00000564063 1566 ntBASIC26.66■■□□□ 1.86
VRTNQ9H8Y1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.65■■□□□ 1.86
VRTNQ9H8Y1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
VRTNQ9H8Y1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VRTNQ9H8Y1 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.64■■□□□ 1.86
VRTNQ9H8Y1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.64■■□□□ 1.86
VRTNQ9H8Y1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.64■■□□□ 1.86
VRTNQ9H8Y1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
VRTNQ9H8Y1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.64■■□□□ 1.85
VRTNQ9H8Y1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
VRTNQ9H8Y1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VRTNQ9H8Y1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
VRTNQ9H8Y1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VRTNQ9H8Y1 AC022413.1-201ENST00000624602 984 ntBASIC26.62■■□□□ 1.85
VRTNQ9H8Y1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
VRTNQ9H8Y1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VRTNQ9H8Y1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VRTNQ9H8Y1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
VRTNQ9H8Y1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.61■■□□□ 1.85
VRTNQ9H8Y1 AL449106.1-201ENST00000608517 1980 ntBASIC26.6■■□□□ 1.85
VRTNQ9H8Y1 GPX1-201ENST00000419349 1106 ntBASIC26.6■■□□□ 1.85
VRTNQ9H8Y1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.6■■□□□ 1.85
VRTNQ9H8Y1 AC092296.2-201ENST00000589470 999 ntBASIC26.6■■□□□ 1.85
VRTNQ9H8Y1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.6■■□□□ 1.85
VRTNQ9H8Y1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
VRTNQ9H8Y1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.59■■□□□ 1.85
VRTNQ9H8Y1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VRTNQ9H8Y1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms