Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HLA-V-202ENST00000446817 847 ntBASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
UPF3BQ9BZI7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.69■■■□□ 2.34
UPF3BQ9BZI7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
UPF3BQ9BZI7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
UPF3BQ9BZI7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 AL449106.1-201ENST00000608517 1980 ntBASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
UPF3BQ9BZI7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.64■■■□□ 2.34
UPF3BQ9BZI7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
UPF3BQ9BZI7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
UPF3BQ9BZI7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
UPF3BQ9BZI7 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.6■■■□□ 2.33
UPF3BQ9BZI7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 LINC01971-201ENST00000617888 1048 ntBASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
UPF3BQ9BZI7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
UPF3BQ9BZI7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.57■■■□□ 2.32
UPF3BQ9BZI7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
UPF3BQ9BZI7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
UPF3BQ9BZI7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.56■■■□□ 2.32
UPF3BQ9BZI7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 AP004609.3-201ENST00000610705 1884 ntBASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
UPF3BQ9BZI7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
UPF3BQ9BZI7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.51■■■□□ 2.32
UPF3BQ9BZI7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L13-201ENST00000554103 1267 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L15-201ENST00000611059 1267 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L23-201ENST00000615195 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L24-201ENST00000617576 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L22-201ENST00000618238 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L20-201ENST00000619712 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L21-201ENST00000622058 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L10-201ENST00000622460 1267 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L25-201ENST00000624915 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 AC091060.1-201ENST00000623524 1766 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
UPF3BQ9BZI7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
UPF3BQ9BZI7 WHAMMP3-201ENST00000611636 1609 ntBASIC29.49■■■□□ 2.31
UPF3BQ9BZI7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
UPF3BQ9BZI7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 DUX4L11-201ENST00000611504 1267 ntBASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 DUX4L12-201ENST00000614593 1267 ntBASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 DUX4L14-201ENST00000621227 1267 ntBASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 ZNRF2P2-203ENST00000454624 420 ntBASIC29.47■■■□□ 2.31
UPF3BQ9BZI7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
UPF3BQ9BZI7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.46■■■□□ 2.31
UPF3BQ9BZI7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.31
UPF3BQ9BZI7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
UPF3BQ9BZI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.45■■■□□ 2.31
UPF3BQ9BZI7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms