Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 SPCS2P3-201ENST00000500401 656 ntBASIC7.6□□□□□ -1.19
SYNE1Q8NF91 AC007029.1-201ENST00000604183 313 ntBASIC7.6□□□□□ -1.19
SYNE1Q8NF91 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SYNE1Q8NF91 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 AC126177.7-201ENST00000547904 679 ntBASIC7.59□□□□□ -1.19
SYNE1Q8NF91 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SYNE1Q8NF91 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SYNE1Q8NF91 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
SYNE1Q8NF91 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 MEST-211ENST00000437945 1455 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 SHF-206ENST00000560471 2499 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE1Q8NF91 HES4-204ENST00000484667 667 ntTSL 3 BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 KRT18P60-201ENST00000312876 1297 ntBASIC7.57□□□□□ -1.2
SYNE1Q8NF91 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 ABCB10P3-201ENST00000561950 2166 ntBASIC7.57□□□□□ -1.2
SYNE1Q8NF91 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 AC092296.2-201ENST00000589470 999 ntBASIC7.57□□□□□ -1.2
SYNE1Q8NF91 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNE1Q8NF91 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 CHST11-203ENST00000547956 936 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 TRIR-205ENST00000592273 783 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 AL139393.2-201ENST00000608721 2025 ntBASIC7.56□□□□□ -1.2
SYNE1Q8NF91 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNE1Q8NF91 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 RP9P-202ENST00000450133 1212 ntBASIC7.55□□□□□ -1.2
SYNE1Q8NF91 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNE1Q8NF91 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNE1Q8NF91 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNE1Q8NF91 AL592295.1-201ENST00000400984 884 ntBASIC7.54□□□□□ -1.2
SYNE1Q8NF91 AC133552.2-201ENST00000619106 1032 ntBASIC7.54□□□□□ -1.2
SYNE1Q8NF91 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNE1Q8NF91 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
SYNE1Q8NF91 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNE1Q8NF91 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNE1Q8NF91 DUX4L9-201ENST00000449051 1259 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms