Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 GPX1-201ENST00000419349 1106 ntBASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH20Q8N6Y1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDH20Q8N6Y1 AC018358.1-201ENST00000631079 1402 ntBASIC25.46■■□□□ 1.67
PCDH20Q8N6Y1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDH20Q8N6Y1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH20Q8N6Y1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH20Q8N6Y1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDH20Q8N6Y1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH20Q8N6Y1 AC022413.1-201ENST00000624602 984 ntBASIC25.45■■□□□ 1.66
PCDH20Q8N6Y1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH20Q8N6Y1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH20Q8N6Y1 DRD5P2-201ENST00000421395 2012 ntBASIC25.44■■□□□ 1.66
PCDH20Q8N6Y1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH20Q8N6Y1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH20Q8N6Y1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDH20Q8N6Y1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH20Q8N6Y1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.43■■□□□ 1.66
PCDH20Q8N6Y1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDH20Q8N6Y1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDH20Q8N6Y1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDH20Q8N6Y1 AC126177.7-201ENST00000547904 679 ntBASIC25.42■■□□□ 1.66
PCDH20Q8N6Y1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH20Q8N6Y1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
PCDH20Q8N6Y1 AC060814.1-201ENST00000554326 538 ntBASIC25.41■■□□□ 1.66
PCDH20Q8N6Y1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDH20Q8N6Y1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH20Q8N6Y1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH20Q8N6Y1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.4■■□□□ 1.66
PCDH20Q8N6Y1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH20Q8N6Y1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDH20Q8N6Y1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.4■■□□□ 1.66
PCDH20Q8N6Y1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH20Q8N6Y1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH20Q8N6Y1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH20Q8N6Y1 AC142086.6-201ENST00000621154 1765 ntBASIC25.39■■□□□ 1.66
PCDH20Q8N6Y1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH20Q8N6Y1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDH20Q8N6Y1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.39■■□□□ 1.65
PCDH20Q8N6Y1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDH20Q8N6Y1 RNF126P1-201ENST00000567452 1320 ntBASIC25.37■■□□□ 1.65
PCDH20Q8N6Y1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDH20Q8N6Y1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH20Q8N6Y1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
PCDH20Q8N6Y1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PCDH20Q8N6Y1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PCDH20Q8N6Y1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH20Q8N6Y1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.36■■□□□ 1.65
PCDH20Q8N6Y1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDH20Q8N6Y1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
PCDH20Q8N6Y1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDH20Q8N6Y1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PCDH20Q8N6Y1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 RARRES2P2-201ENST00000394842 485 ntBASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH20Q8N6Y1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH20Q8N6Y1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PCDH20Q8N6Y1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PCDH20Q8N6Y1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDH20Q8N6Y1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH20Q8N6Y1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH20Q8N6Y1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH20Q8N6Y1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH20Q8N6Y1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH20Q8N6Y1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH20Q8N6Y1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH20Q8N6Y1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH20Q8N6Y1 AC092296.2-201ENST00000589470 999 ntBASIC25.29■■□□□ 1.64
PCDH20Q8N6Y1 AL359258.2-201ENST00000564063 1566 ntBASIC25.29■■□□□ 1.64
PCDH20Q8N6Y1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
PCDH20Q8N6Y1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDH20Q8N6Y1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH20Q8N6Y1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH20Q8N6Y1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
PCDH20Q8N6Y1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH20Q8N6Y1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH20Q8N6Y1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH20Q8N6Y1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH20Q8N6Y1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH20Q8N6Y1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH20Q8N6Y1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms