Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ARHGEF39Q8N4T4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.78■■□□□ 1.4
ARHGEF39Q8N4T4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ARHGEF39Q8N4T4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 AC142086.6-201ENST00000621154 1765 ntBASIC23.76■■□□□ 1.39
ARHGEF39Q8N4T4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ARHGEF39Q8N4T4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ARHGEF39Q8N4T4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.75■■□□□ 1.39
ARHGEF39Q8N4T4 LINC01003-201ENST00000564834 1764 ntBASIC23.75■■□□□ 1.39
ARHGEF39Q8N4T4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 AC060814.1-201ENST00000554326 538 ntBASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
ARHGEF39Q8N4T4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ARHGEF39Q8N4T4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ARHGEF39Q8N4T4 GPX1-201ENST00000419349 1106 ntBASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ARHGEF39Q8N4T4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.7■■□□□ 1.38
ARHGEF39Q8N4T4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ARHGEF39Q8N4T4 AC022413.1-201ENST00000624602 984 ntBASIC23.69■■□□□ 1.38
ARHGEF39Q8N4T4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ARHGEF39Q8N4T4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ARHGEF39Q8N4T4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ARHGEF39Q8N4T4 AC092296.2-201ENST00000589470 999 ntBASIC23.67■■□□□ 1.38
ARHGEF39Q8N4T4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 BX255925.1-201ENST00000566954 1854 ntBASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ARHGEF39Q8N4T4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.64■■□□□ 1.38
ARHGEF39Q8N4T4 AL157400.5-201ENST00000507624 621 ntBASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 AC126177.7-201ENST00000547904 679 ntBASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 AL359258.2-201ENST00000564063 1566 ntBASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 RNF126P1-201ENST00000567452 1320 ntBASIC23.62■■□□□ 1.37
ARHGEF39Q8N4T4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ARHGEF39Q8N4T4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ARHGEF39Q8N4T4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ARHGEF39Q8N4T4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.6■■□□□ 1.37
ARHGEF39Q8N4T4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 RARRES2P2-201ENST00000394842 485 ntBASIC23.58■■□□□ 1.37
ARHGEF39Q8N4T4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ARHGEF39Q8N4T4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.56■■□□□ 1.36
ARHGEF39Q8N4T4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF39Q8N4T4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF39Q8N4T4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms