Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RFX7Q2KHR2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
RFX7Q2KHR2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.53■■■□□ 2.48
RFX7Q2KHR2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RFX7Q2KHR2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RFX7Q2KHR2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.52■■■□□ 2.48
RFX7Q2KHR2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.52■■■□□ 2.48
RFX7Q2KHR2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RFX7Q2KHR2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
RFX7Q2KHR2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RFX7Q2KHR2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
RFX7Q2KHR2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RFX7Q2KHR2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
RFX7Q2KHR2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
RFX7Q2KHR2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.49■■■□□ 2.47
RFX7Q2KHR2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RFX7Q2KHR2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RFX7Q2KHR2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
RFX7Q2KHR2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RFX7Q2KHR2 AC060814.1-201ENST00000554326 538 ntBASIC30.46■■■□□ 2.47
RFX7Q2KHR2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RFX7Q2KHR2 AC022413.1-201ENST00000624602 984 ntBASIC30.45■■■□□ 2.47
RFX7Q2KHR2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RFX7Q2KHR2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
RFX7Q2KHR2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RFX7Q2KHR2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
RFX7Q2KHR2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RFX7Q2KHR2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RFX7Q2KHR2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 MIR219A2-201ENST00000608502 1504 ntBASIC30.43■■■□□ 2.46
RFX7Q2KHR2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RFX7Q2KHR2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RFX7Q2KHR2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RFX7Q2KHR2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RFX7Q2KHR2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.41■■■□□ 2.46
RFX7Q2KHR2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
RFX7Q2KHR2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
RFX7Q2KHR2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RFX7Q2KHR2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
RFX7Q2KHR2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
RFX7Q2KHR2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.4■■■□□ 2.46
RFX7Q2KHR2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RFX7Q2KHR2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
RFX7Q2KHR2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RFX7Q2KHR2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RFX7Q2KHR2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RFX7Q2KHR2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.36■■■□□ 2.45
RFX7Q2KHR2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RFX7Q2KHR2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.36■■■□□ 2.45
RFX7Q2KHR2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RFX7Q2KHR2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.34■■■□□ 2.45
RFX7Q2KHR2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
RFX7Q2KHR2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
RFX7Q2KHR2 AC092296.2-201ENST00000589470 999 ntBASIC30.34■■■□□ 2.45
RFX7Q2KHR2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RFX7Q2KHR2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
RFX7Q2KHR2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFX7Q2KHR2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.32■■■□□ 2.44
RFX7Q2KHR2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
RFX7Q2KHR2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFX7Q2KHR2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFX7Q2KHR2 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.31■■■□□ 2.44
RFX7Q2KHR2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RFX7Q2KHR2 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.31■■■□□ 2.44
RFX7Q2KHR2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
RFX7Q2KHR2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RFX7Q2KHR2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
RFX7Q2KHR2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RFX7Q2KHR2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
RFX7Q2KHR2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RFX7Q2KHR2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
RFX7Q2KHR2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RFX7Q2KHR2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.28■■■□□ 2.44
RFX7Q2KHR2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RFX7Q2KHR2 NTF6A-201ENST00000591175 560 ntBASIC30.28■■■□□ 2.44
RFX7Q2KHR2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.28■■■□□ 2.44
RFX7Q2KHR2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.28■■■□□ 2.44
RFX7Q2KHR2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.28■■■□□ 2.44
RFX7Q2KHR2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
RFX7Q2KHR2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.27■■■□□ 2.44
RFX7Q2KHR2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RFX7Q2KHR2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.26■■■□□ 2.43
RFX7Q2KHR2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RFX7Q2KHR2 AL157400.5-201ENST00000507624 621 ntBASIC30.25■■■□□ 2.43
RFX7Q2KHR2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
RFX7Q2KHR2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RFX7Q2KHR2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RFX7Q2KHR2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
RFX7Q2KHR2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.24■■■□□ 2.43
RFX7Q2KHR2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
RFX7Q2KHR2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RFX7Q2KHR2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.23■■■□□ 2.43
RFX7Q2KHR2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.22■■■□□ 2.43
RFX7Q2KHR2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RFX7Q2KHR2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms