Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 CRN1YLR429W 1956 nt7.99□□□□□ -1.13 RIP-Chip
UBP3Q01477 ATP10YLR393W 840 nt7.99□□□□□ -1.13
UBP3Q01477 NAT5YOR253W 531 nt7.99□□□□□ -1.13
UBP3Q01477 EDC2YER035W 438 nt7.98□□□□□ -1.13
UBP3Q01477 YHR140WYHR140W 720 nt7.98□□□□□ -1.13
UBP3Q01477 DAL80YKR034W 810 nt7.98□□□□□ -1.13
UBP3Q01477 YPC1YBR183W 951 nt7.98□□□□□ -1.13
UBP3Q01477 SGF73YGL066W 1974 nt7.98□□□□□ -1.13
UBP3Q01477 YDR215CYDR215C 414 nt7.97□□□□□ -1.13
UBP3Q01477 RCF2YNR018W 675 nt7.97□□□□□ -1.13
UBP3Q01477 SPS1YDR523C 1473 nt7.97□□□□□ -1.13
UBP3Q01477 RSM23YGL129C 1353 nt7.97□□□□□ -1.13
UBP3Q01477 DPB2YPR175W 2070 nt7.96□□□□□ -1.13
UBP3Q01477 PSA1YDL055C 1086 nt7.96□□□□□ -1.14
UBP3Q01477 PIC2YER053C 903 nt7.96□□□□□ -1.14
UBP3Q01477 YMR147WYMR147W 672 nt7.96□□□□□ -1.14
UBP3Q01477 ITR1YDR497C 1755 nt7.96□□□□□ -1.14
UBP3Q01477 CIR2YOR356W 1896 nt7.96□□□□□ -1.14
UBP3Q01477 SPS22YCL048W 1392 nt7.96□□□□□ -1.14
UBP3Q01477 RSC9YML127W 1746 nt7.95□□□□□ -1.14 RIP-Chip
UBP3Q01477 YCR099CYCR099C 468 nt7.95□□□□□ -1.14
UBP3Q01477 YEL074WYEL074W 339 nt7.95□□□□□ -1.14
UBP3Q01477 COS6YGR295C 1146 nt7.95□□□□□ -1.14
UBP3Q01477 YJR142WYJR142W 1029 nt7.95□□□□□ -1.14
UBP3Q01477 SCO2YBR024W 906 nt7.95□□□□□ -1.14
UBP3Q01477 OPT1YJL212C 2400 nt7.95□□□□□ -1.14
UBP3Q01477 YEN1YER041W 2280 nt7.95□□□□□ -1.14 RIP-Chip
UBP3Q01477 RUP1YOR138C 2016 nt7.95□□□□□ -1.14
UBP3Q01477 PPZ2YDR436W 2133 nt7.94□□□□□ -1.14 RIP-Chip
UBP3Q01477 YNL040WYNL040W 1371 nt7.94□□□□□ -1.14 RIP-Chip
UBP3Q01477 LEO1YOR123C 1395 nt7.94□□□□□ -1.14
UBP3Q01477 APM1YPL259C 1428 nt7.94□□□□□ -1.14
UBP3Q01477 NMA2YGR010W 1188 nt7.93□□□□□ -1.14 RIP-Chip
UBP3Q01477 PET10YKR046C 852 nt7.93□□□□□ -1.14
UBP3Q01477 MOD5YOR274W 1287 nt7.93□□□□□ -1.14
UBP3Q01477 RGT2YDL138W 2292 nt7.92□□□□□ -1.14
UBP3Q01477 YBL113CYBL113C 2379 nt7.92□□□□□ -1.14
UBP3Q01477 BDS1YOL164W 1941 nt7.91□□□□□ -1.14
UBP3Q01477 AFG2YLR397C 2343 nt7.91□□□□□ -1.14 RIP-Chip
UBP3Q01477 SLM3YDL033C 1254 nt7.91□□□□□ -1.14
UBP3Q01477 YEL034C-AYEL034C-A 603 nt7.91□□□□□ -1.14
UBP3Q01477 STS1YIR011C 960 nt7.91□□□□□ -1.14
UBP3Q01477 HXT13YEL069C 1695 nt7.91□□□□□ -1.14
UBP3Q01477 PRC1YMR297W 1599 nt7.9□□□□□ -1.14 RIP-Chip
UBP3Q01477 HRB1YNL004W 1365 nt7.9□□□□□ -1.14
UBP3Q01477 DOC1YGL240W 753 nt7.9□□□□□ -1.14
UBP3Q01477 OPI1YHL020C 1215 nt7.9□□□□□ -1.14
UBP3Q01477 YOR268CYOR268C 399 nt7.9□□□□□ -1.14
UBP3Q01477 DRS1YLL008W 2259 nt7.9□□□□□ -1.15
UBP3Q01477 MSB3YNL293W 1902 nt7.9□□□□□ -1.15
UBP3Q01477 ICE2YIL090W 1476 nt7.89□□□□□ -1.15
UBP3Q01477 CDC10YCR002C 969 nt7.89□□□□□ -1.15 RIP-Chip
UBP3Q01477 GET2YER083C 858 nt7.89□□□□□ -1.15
UBP3Q01477 YLR358CYLR358C 564 nt7.89□□□□□ -1.15
UBP3Q01477 CAR2YLR438W 1275 nt7.89□□□□□ -1.15
UBP3Q01477 ADH6YMR318C 1083 nt7.89□□□□□ -1.15
UBP3Q01477 SIR2YDL042C 1689 nt7.89□□□□□ -1.15
UBP3Q01477 LSM12YHR121W 564 nt7.88□□□□□ -1.15 RIP-Chip
UBP3Q01477 ATO2YNR002C 849 nt7.88□□□□□ -1.15
UBP3Q01477 YPT10YBR264C 600 nt7.88□□□□□ -1.15 RIP-Chip
UBP3Q01477 CMR1YDL156W 1569 nt7.88□□□□□ -1.15
UBP3Q01477 HNM1YGL077C 1692 nt7.87□□□□□ -1.15
UBP3Q01477 OSM1YJR051W 1506 nt7.87□□□□□ -1.15
UBP3Q01477 MAS2YHR024C 1449 nt7.86□□□□□ -1.15
UBP3Q01477 SKP1YDR328C 585 nt7.86□□□□□ -1.15
UBP3Q01477 AIM41YOR215C 558 nt7.86□□□□□ -1.15
UBP3Q01477 DSC3YOR223W 879 nt7.86□□□□□ -1.15 RIP-Chip
UBP3Q01477 TRP1YDR007W 675 nt7.85□□□□□ -1.15
UBP3Q01477 SPE4YLR146C 903 nt7.85□□□□□ -1.15
UBP3Q01477 YMR253CYMR253C 1245 nt7.85□□□□□ -1.15
UBP3Q01477 CKI1YLR133W 1749 nt7.85□□□□□ -1.15
UBP3Q01477 APM4YOL062C 1476 nt7.85□□□□□ -1.15
UBP3Q01477 YFL052WYFL052W 1398 nt7.84□□□□□ -1.15
UBP3Q01477 YHP1YDR451C 1062 nt7.84□□□□□ -1.15
UBP3Q01477 SNF7YLR025W 723 nt7.84□□□□□ -1.15 RIP-Chip
UBP3Q01477 OCA1YNL099C 717 nt7.84□□□□□ -1.15
UBP3Q01477 MSI1YBR195C 1269 nt7.84□□□□□ -1.15 RIP-Chip
UBP3Q01477 ERR3YMR323W 1314 nt7.83□□□□□ -1.16
UBP3Q01477 ERR1YOR393W 1314 nt7.83□□□□□ -1.16
UBP3Q01477 ERR2YPL281C 1314 nt7.83□□□□□ -1.16
UBP3Q01477 YPL264CYPL264C 1062 nt7.83□□□□□ -1.16
UBP3Q01477 SMC5YOL034W 3282 nt7.83□□□□□ -1.16 RIP-Chip
UBP3Q01477 ARO10YDR380W 1908 nt7.83□□□□□ -1.16
UBP3Q01477 CDC3YLR314C 1563 nt7.83□□□□□ -1.16 RIP-Chip
UBP3Q01477 AGP2YBR132C 1791 nt7.82□□□□□ -1.16
UBP3Q01477 HXT9YJL219W 1704 nt7.82□□□□□ -1.16
UBP3Q01477 TAF11YML015C 1041 nt7.82□□□□□ -1.16
UBP3Q01477 YBL081WYBL081W 1107 nt7.82□□□□□ -1.16
UBP3Q01477 BAP3YDR046C 1815 nt7.82□□□□□ -1.16
UBP3Q01477 TCB1YOR086C 3561 nt7.81□□□□□ -1.16 RIP-Chip
UBP3Q01477 YGL081WYGL081W 963 nt7.81□□□□□ -1.16
UBP3Q01477 ERP5YHR110W 639 nt7.81□□□□□ -1.16
UBP3Q01477 PRY2YKR013W 990 nt7.81□□□□□ -1.16
UBP3Q01477 NSE5YML023C 1671 nt7.81□□□□□ -1.16
UBP3Q01477 PAP1YKR002W 1707 nt7.81□□□□□ -1.16 RIP-Chip
UBP3Q01477 IES1YFL013C 2079 nt7.8□□□□□ -1.16 RIP-Chip
UBP3Q01477 TPI1YDR050C 747 nt7.8□□□□□ -1.16
UBP3Q01477 PIH1YHR034C 1035 nt7.8□□□□□ -1.16
UBP3Q01477 YLR030WYLR030W 792 nt7.8□□□□□ -1.16
UBP3Q01477 YPL168WYPL168W 1293 nt7.8□□□□□ -1.16 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms