Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 CACUL1-206ENST00000493518 3217 ntTSL 1 (best)14.97□□□□□ -0.013e-9■■■■■ 31.5
LSM11P83369 CACUL1-207ENST00000544392 1060 ntTSL 212.95□□□□□ -0.343e-9■■■■■ 31.5
LSM11P83369 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.633e-9■■■■■ 31.5
LSM11P83369 AC024267.1-201ENST00000582320 895 ntBASIC14.5□□□□□ -0.098e-7■■■■■ 31.4
LSM11P83369 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.223e-10■■■■■ 31.4
LSM11P83369 PPP1R12A-208ENST00000547330 2275 ntTSL 1 (best)13.65□□□□□ -0.222e-8■■■■■ 31.3
LSM11P83369 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.582e-8■■■■■ 31.3
LSM11P83369 PPP1R12A-202ENST00000437004 4639 ntTSL 1 (best) BASIC10.33□□□□□ -0.762e-8■■■■■ 31.3
LSM11P83369 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.782e-8■■■■■ 31.3
LSM11P83369 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC9.13□□□□□ -0.952e-8■■■■■ 31.3
LSM11P83369 PPP1R12A-216ENST00000550510 631 ntTSL 58.15□□□□□ -1.12e-8■■■■■ 31.3
LSM11P83369 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.82□□□□□ -0.22e-6■■■■■ 31.3
LSM11P83369 PHKG2-211ENST00000569762 880 ntTSL 1 (best)12.64□□□□□ -0.392e-6■■■■■ 31.3
LSM11P83369 ZNF131-202ENST00000499046 990 ntTSL 1 (best)10.79□□□□□ -0.681e-12■■■■■ 31.2
LSM11P83369 ZNF131-211ENST00000508795 465 ntTSL 58.25□□□□□ -1.091e-12■■■■■ 31.2
LSM11P83369 ZNF131-204ENST00000503599 750 ntTSL 38.21□□□□□ -1.11e-12■■■■■ 31.2
LSM11P83369 ZNF131-209ENST00000507393 583 ntTSL 47.34□□□□□ -1.231e-12■■■■■ 31.2
LSM11P83369 ZNF131-219ENST00000514169 476 ntTSL 36.28□□□□□ -1.41e-12■■■■■ 31.2
LSM11P83369 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.419e-10■■■■■ 30.9
LSM11P83369 HCN3-204ENST00000496230 3245 ntTSL 211.4□□□□□ -0.589e-10■■■■■ 30.9
LSM11P83369 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.33■□□□□ 0.684e-17■■■■■ 30.9
LSM11P83369 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.274e-7■■■■■ 30.9
LSM11P83369 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.85■□□□□ 0.614e-7■■■■■ 30.9
LSM11P83369 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.64e-7■■■■■ 30.9
LSM11P83369 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.594e-7■■■■■ 30.9
LSM11P83369 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.594e-7■■■■■ 30.9
LSM11P83369 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.534e-7■■■■■ 30.9
LSM11P83369 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.524e-7■■■■■ 30.9
LSM11P83369 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.54e-7■■■■■ 30.9
LSM11P83369 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.474e-7■■■■■ 30.9
LSM11P83369 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.92■□□□□ 0.464e-7■■■■■ 30.9
LSM11P83369 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.89■□□□□ 0.454e-7■■■■■ 30.9
LSM11P83369 ARL5A-204ENST00000458140 1076 ntTSL 517.63■□□□□ 0.414e-7■■■■■ 30.9
LSM11P83369 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.28■□□□□ 0.364e-7■■■■■ 30.9
LSM11P83369 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.324e-7■■■■■ 30.9
LSM11P83369 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.284e-7■■■■■ 30.9
LSM11P83369 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.37■□□□□ 0.214e-7■■■■■ 30.9
LSM11P83369 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.184e-7■■■■■ 30.9
LSM11P83369 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.174e-7■■■■■ 30.9
LSM11P83369 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.164e-7■■■■■ 30.9
LSM11P83369 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.14e-7■■■■■ 30.9
LSM11P83369 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.044e-7■■■■■ 30.9
LSM11P83369 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.024e-7■■■■■ 30.9
LSM11P83369 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.88□□□□□ -0.034e-7■■■■■ 30.9
LSM11P83369 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.81□□□□□ -0.044e-7■■■■■ 30.9
LSM11P83369 CLPTM1L-207ENST00000506641 792 ntTSL 514.75□□□□□ -0.054e-7■■■■■ 30.9
LSM11P83369 CLPTM1L-215ENST00000515719 382 ntTSL 214.75□□□□□ -0.054e-7■■■■■ 30.9
LSM11P83369 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.24e-7■■■■■ 30.9
LSM11P83369 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.234e-7■■■■■ 30.9
LSM11P83369 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.244e-7■■■■■ 30.9
LSM11P83369 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.344e-7■■■■■ 30.9
LSM11P83369 CCDC130-208ENST00000588071 1157 ntTSL 512.71□□□□□ -0.374e-7■■■■■ 30.9
LSM11P83369 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.424e-7■■■■■ 30.9
LSM11P83369 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.24□□□□□ -0.454e-7■■■■■ 30.9
LSM11P83369 ARL5A-203ENST00000446896 1268 ntTSL 212.06□□□□□ -0.484e-7■■■■■ 30.9
LSM11P83369 CCDC130-202ENST00000540216 995 ntTSL 211.69□□□□□ -0.544e-7■■■■■ 30.9
LSM11P83369 ZCCHC8-205ENST00000540586 1250 ntTSL 211.68□□□□□ -0.544e-7■■■■■ 30.9
LSM11P83369 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.554e-7■■■■■ 30.9
LSM11P83369 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.584e-7■■■■■ 30.9
LSM11P83369 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.594e-7■■■■■ 30.9
LSM11P83369 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.64e-7■■■■■ 30.9
LSM11P83369 AC068547.1-201ENST00000636024 1303 ntAPPRIS ALT2 TSL 511.08□□□□□ -0.644e-7■■■■■ 30.9
LSM11P83369 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC10.83□□□□□ -0.684e-7■■■■■ 30.9
LSM11P83369 ARL15-203ENST00000505383 536 ntTSL 310.83□□□□□ -0.684e-7■■■■■ 30.9
LSM11P83369 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.694e-7■■■■■ 30.9
LSM11P83369 ARL15-206ENST00000510591 804 ntTSL 510.71□□□□□ -0.694e-7■■■■■ 30.9
LSM11P83369 EXOC4-220ENST00000486409 605 ntTSL 410.64□□□□□ -0.714e-7■■■■■ 30.9
LSM11P83369 CLPTM1L-202ENST00000503042 3540 ntTSL 210.27□□□□□ -0.774e-7■■■■■ 30.9
LSM11P83369 AC138819.1-201ENST00000509363 431 ntTSL 3 BASIC10.25□□□□□ -0.771e-8■■■■■ 30.9
LSM11P83369 ARL15-204ENST00000505630 628 ntTSL 1 (best)10.13□□□□□ -0.794e-7■■■■■ 30.9
LSM11P83369 ARL15-205ENST00000507646 578 ntTSL 5 BASIC10.13□□□□□ -0.794e-7■■■■■ 30.9
LSM11P83369 EXOC4-202ENST00000393161 1604 ntTSL 5 BASIC10.1□□□□□ -0.794e-7■■■■■ 30.9
LSM11P83369 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.794e-7■■■■■ 30.9
LSM11P83369 ZCCHC8-202ENST00000536663 1252 ntTSL 59.96□□□□□ -0.824e-7■■■■■ 30.9
LSM11P83369 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.934e-7■■■■■ 30.9
LSM11P83369 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.934e-7■■■■■ 30.9
LSM11P83369 CDK5RAP2-205ENST00000425647 2747 ntTSL 29.04□□□□□ -0.962e-7■■■■■ 30.9
LSM11P83369 EXOC4-219ENST00000486013 1600 ntTSL 58.84□□□□□ -0.994e-7■■■■■ 30.9
LSM11P83369 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -13e-13■■■■■ 30.9
LSM11P83369 CLPTM1L-204ENST00000503534 742 ntTSL 28.72□□□□□ -1.014e-7■■■■■ 30.9
LSM11P83369 CDK5RAP2-216ENST00000483412 6235 ntTSL 1 (best)8.44□□□□□ -1.064e-7■■■■■ 30.9
LSM11P83369 EXOC4-205ENST00000462055 2364 ntTSL 1 (best)7.75□□□□□ -1.174e-7■■■■■ 30.9
LSM11P83369 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC7.69□□□□□ -1.184e-7■■■■■ 30.9
LSM11P83369 CDK5RAP2-204ENST00000416449 3902 ntTSL 57.61□□□□□ -1.192e-7■■■■■ 30.9
LSM11P83369 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.254e-7■■■■■ 30.9
LSM11P83369 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.254e-7■■■■■ 30.9
LSM11P83369 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.254e-7■■■■■ 30.9
LSM11P83369 AC068547.1-202ENST00000637224 2827 ntAPPRIS ALT2 TSL 57.07□□□□□ -1.284e-7■■■■■ 30.9
LSM11P83369 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.374e-7■■■■■ 30.9
LSM11P83369 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.72□□□□□ -1.494e-7■■■■■ 30.9
LSM11P83369 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.46□□□□□ -1.544e-7■■■■■ 30.9
LSM11P83369 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.741e-6■■■■■ 30.8
LSM11P83369 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.511e-6■■■■■ 30.8
LSM11P83369 NOL4L-209ENST00000485364 885 ntTSL 1 (best)20.78■□□□□ 0.921e-6■■■■■ 30.8
LSM11P83369 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 320.49■□□□□ 0.871e-6■■■■■ 30.8
LSM11P83369 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 01e-6■■■■■ 30.8
LSM11P83369 ARFRP1-211ENST00000618568 1612 ntTSL 318.65■□□□□ 0.584e-8■■■■■ 30.7
LSM11P83369 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.49■□□□□ 0.234e-8■■■■■ 30.7
LSM11P83369 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.114e-8■■■■■ 30.7
LSM11P83369 UBE2E1-210ENST00000493707 857 ntTSL 310.64□□□□□ -0.715e-7■■■■■ 30.7
Retrieved 100 of 11,495 protein–RNA pairs in 349.7 ms