Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SPCS3P61009 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPCS3P61009 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SPCS3P61009 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.12■□□□□ 0.81
SPCS3P61009 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.12■□□□□ 0.81
SPCS3P61009 LINC00273-201ENST00000539813 1452 ntBASIC20.11■□□□□ 0.81
SPCS3P61009 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPCS3P61009 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPCS3P61009 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPCS3P61009 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.11■□□□□ 0.81
SPCS3P61009 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPCS3P61009 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SPCS3P61009 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPCS3P61009 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPCS3P61009 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SPCS3P61009 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.1■□□□□ 0.81
SPCS3P61009 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPCS3P61009 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.09■□□□□ 0.81
SPCS3P61009 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPCS3P61009 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.09■□□□□ 0.81
SPCS3P61009 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPCS3P61009 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SPCS3P61009 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPCS3P61009 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPCS3P61009 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPCS3P61009 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.08■□□□□ 0.81
SPCS3P61009 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPCS3P61009 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPCS3P61009 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.07■□□□□ 0.8
SPCS3P61009 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SPCS3P61009 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPCS3P61009 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.06■□□□□ 0.8
SPCS3P61009 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPCS3P61009 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPCS3P61009 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SPCS3P61009 AC145676.1-201ENST00000514988 2004 ntBASIC20.05■□□□□ 0.8
SPCS3P61009 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPCS3P61009 SUZ12P1-203ENST00000578195 985 ntBASIC20.05■□□□□ 0.8
SPCS3P61009 MIR6090-201ENST00000622481 60 ntBASIC20.05■□□□□ 0.8
SPCS3P61009 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPCS3P61009 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.04■□□□□ 0.8
SPCS3P61009 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPCS3P61009 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPCS3P61009 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPCS3P61009 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SPCS3P61009 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPCS3P61009 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPCS3P61009 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPCS3P61009 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPCS3P61009 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPCS3P61009 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPCS3P61009 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.01■□□□□ 0.79
SPCS3P61009 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPCS3P61009 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SPCS3P61009 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SPCS3P61009 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPCS3P61009 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.01■□□□□ 0.79
SPCS3P61009 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPCS3P61009 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20■□□□□ 0.79
SPCS3P61009 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPCS3P61009 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPCS3P61009 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPCS3P61009 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPCS3P61009 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.99■□□□□ 0.79
SPCS3P61009 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SPCS3P61009 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPCS3P61009 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPCS3P61009 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPCS3P61009 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.99■□□□□ 0.79
SPCS3P61009 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.98■□□□□ 0.79
SPCS3P61009 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPCS3P61009 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SPCS3P61009 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPCS3P61009 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.98■□□□□ 0.79
SPCS3P61009 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPCS3P61009 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.98■□□□□ 0.79
SPCS3P61009 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.98■□□□□ 0.79
SPCS3P61009 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.98■□□□□ 0.79
SPCS3P61009 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPCS3P61009 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPCS3P61009 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.97■□□□□ 0.79
SPCS3P61009 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPCS3P61009 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPCS3P61009 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPCS3P61009 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPCS3P61009 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPCS3P61009 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPCS3P61009 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.95■□□□□ 0.78
SPCS3P61009 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPCS3P61009 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPCS3P61009 DUX4L28-201ENST00000623687 678 ntBASIC19.95■□□□□ 0.78
SPCS3P61009 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPCS3P61009 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.94■□□□□ 0.78
SPCS3P61009 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPCS3P61009 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
SPCS3P61009 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.94■□□□□ 0.78
SPCS3P61009 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.94■□□□□ 0.78
SPCS3P61009 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.94■□□□□ 0.78
SPCS3P61009 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.94■□□□□ 0.78
SPCS3P61009 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms