Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.61■□□□□ 0.57
CMC4P56277 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMC4P56277 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CMC4P56277 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CMC4P56277 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CMC4P56277 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMC4P56277 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMC4P56277 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CMC4P56277 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
CMC4P56277 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CMC4P56277 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.58■□□□□ 0.56
CMC4P56277 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CMC4P56277 BX255925.1-201ENST00000566954 1854 ntBASIC18.58■□□□□ 0.56
CMC4P56277 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CMC4P56277 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.57■□□□□ 0.56
CMC4P56277 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.57■□□□□ 0.56
CMC4P56277 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CMC4P56277 LINC01003-201ENST00000564834 1764 ntBASIC18.57■□□□□ 0.56
CMC4P56277 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CMC4P56277 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CMC4P56277 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CMC4P56277 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CMC4P56277 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CMC4P56277 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CMC4P56277 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.56■□□□□ 0.56
CMC4P56277 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CMC4P56277 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CMC4P56277 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.56■□□□□ 0.56
CMC4P56277 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CMC4P56277 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CMC4P56277 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CMC4P56277 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CMC4P56277 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CMC4P56277 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CMC4P56277 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CMC4P56277 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CMC4P56277 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
CMC4P56277 AC022413.1-201ENST00000624602 984 ntBASIC18.54■□□□□ 0.56
CMC4P56277 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.53■□□□□ 0.56
CMC4P56277 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.53■□□□□ 0.56
CMC4P56277 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.53■□□□□ 0.56
CMC4P56277 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CMC4P56277 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.52■□□□□ 0.56
CMC4P56277 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.52■□□□□ 0.56
CMC4P56277 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.52■□□□□ 0.55
CMC4P56277 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.52■□□□□ 0.55
CMC4P56277 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMC4P56277 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMC4P56277 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMC4P56277 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMC4P56277 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.51■□□□□ 0.55
CMC4P56277 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CMC4P56277 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CMC4P56277 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.51■□□□□ 0.55
CMC4P56277 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMC4P56277 WHAMMP3-201ENST00000611636 1609 ntBASIC18.51■□□□□ 0.55
CMC4P56277 AL359258.2-201ENST00000564063 1566 ntBASIC18.51■□□□□ 0.55
CMC4P56277 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMC4P56277 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CMC4P56277 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CMC4P56277 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.5■□□□□ 0.55
CMC4P56277 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.5■□□□□ 0.55
CMC4P56277 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.5■□□□□ 0.55
CMC4P56277 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CMC4P56277 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.5■□□□□ 0.55
CMC4P56277 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CMC4P56277 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMC4P56277 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CMC4P56277 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMC4P56277 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.49■□□□□ 0.55
CMC4P56277 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.49■□□□□ 0.55
CMC4P56277 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.49■□□□□ 0.55
CMC4P56277 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMC4P56277 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMC4P56277 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMC4P56277 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CMC4P56277 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.48■□□□□ 0.55
CMC4P56277 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.48■□□□□ 0.55
CMC4P56277 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMC4P56277 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CMC4P56277 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMC4P56277 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CMC4P56277 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.47■□□□□ 0.55
CMC4P56277 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 GPX1-201ENST00000419349 1106 ntBASIC18.47■□□□□ 0.55
CMC4P56277 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.47■□□□□ 0.55
CMC4P56277 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CMC4P56277 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CMC4P56277 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CMC4P56277 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CMC4P56277 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CMC4P56277 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.46■□□□□ 0.55
CMC4P56277 AC060814.1-201ENST00000554326 538 ntBASIC18.46■□□□□ 0.55
CMC4P56277 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.46■□□□□ 0.54
CMC4P56277 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms