Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 VPS72YDR485C 2388 nt7.7□□□□□ -1.18
SUB1P54000 TCB1YOR086C 3561 nt7.7□□□□□ -1.18
SUB1P54000 TPI1YDR050C 747 nt7.7□□□□□ -1.18
SUB1P54000 PAU5YFL020C 369 nt7.7□□□□□ -1.18
SUB1P54000 APT1YML022W 564 nt7.7□□□□□ -1.18
SUB1P54000 YNR001W-AYNR001W-A 219 nt7.7□□□□□ -1.18
SUB1P54000 DDC1YPL194W 1839 nt7.69□□□□□ -1.18
SUB1P54000 STE4YOR212W 1272 nt7.69□□□□□ -1.18
SUB1P54000 RFS1YBR052C 633 nt7.69□□□□□ -1.18
SUB1P54000 FLC2YAL053W 2352 nt7.69□□□□□ -1.18
SUB1P54000 ECM30YLR436C 3825 nt7.68□□□□□ -1.18
SUB1P54000 ARO10YDR380W 1908 nt7.68□□□□□ -1.18
SUB1P54000 YPT31YER031C 672 nt7.68□□□□□ -1.18
SUB1P54000 YIR017W-AYIR017W-A 600 nt7.68□□□□□ -1.18
SUB1P54000 CAN1YEL063C 1773 nt7.68□□□□□ -1.18
SUB1P54000 PET10YKR046C 852 nt7.67□□□□□ -1.18
SUB1P54000 YMR166CYMR166C 1107 nt7.67□□□□□ -1.18
SUB1P54000 PRE10YOR362C 867 nt7.67□□□□□ -1.18
SUB1P54000 IPL1YPL209C 1104 nt7.67□□□□□ -1.18
SUB1P54000 ASR1YPR093C 867 nt7.67□□□□□ -1.18
SUB1P54000 TIM50YPL063W 1431 nt7.67□□□□□ -1.18
SUB1P54000 YGR068W-AYGR068W-A 96 nt7.65□□□□□ -1.18
SUB1P54000 AIM17YHL021C 1398 nt7.65□□□□□ -1.18
SUB1P54000 YHR033WYHR033W 1272 nt7.65□□□□□ -1.18
SUB1P54000 SNF7YLR025W 723 nt7.65□□□□□ -1.18
SUB1P54000 YLR349WYLR349W 507 nt7.65□□□□□ -1.18
SUB1P54000 ARG7YMR062C 1326 nt7.65□□□□□ -1.18
SUB1P54000 YNL247WYNL247W 2304 nt7.64□□□□□ -1.19
SUB1P54000 YMR155WYMR155W 1644 nt7.64□□□□□ -1.19
SUB1P54000 JHD1YER051W 1479 nt7.64□□□□□ -1.19
SUB1P54000 MSS51YLR203C 1311 nt7.64□□□□□ -1.19
SUB1P54000 BRN1YBL097W 2265 nt7.64□□□□□ -1.19
SUB1P54000 ENB1YOL158C 1821 nt7.64□□□□□ -1.19
SUB1P54000 LDB19YOR322C 2457 nt7.63□□□□□ -1.19
SUB1P54000 DUG1YFR044C 1446 nt7.63□□□□□ -1.19
SUB1P54000 LSP1YPL004C 1026 nt7.63□□□□□ -1.19
SUB1P54000 PAP1YKR002W 1707 nt7.63□□□□□ -1.19
SUB1P54000 PET494YNR045W 1470 nt7.62□□□□□ -1.19
SUB1P54000 EEB1YPL095C 1371 nt7.62□□□□□ -1.19
SUB1P54000 YHR145CYHR145C 357 nt7.62□□□□□ -1.19
SUB1P54000 HRA1HRA1 564 nt7.62□□□□□ -1.19
SUB1P54000 PRY2YKR013W 990 nt7.62□□□□□ -1.19
SUB1P54000 CAR2YLR438W 1275 nt7.62□□□□□ -1.19
SUB1P54000 YPC1YBR183W 951 nt7.62□□□□□ -1.19
SUB1P54000 TRP5YGL026C 2124 nt7.61□□□□□ -1.19
SUB1P54000 CIT2YCR005C 1383 nt7.61□□□□□ -1.19
SUB1P54000 YJU2YKL095W 837 nt7.61□□□□□ -1.19
SUB1P54000 NAP1YKR048C 1254 nt7.61□□□□□ -1.19
SUB1P54000 PGC1YPL206C 966 nt7.61□□□□□ -1.19
SUB1P54000 RTC2YBR147W 891 nt7.61□□□□□ -1.19
SUB1P54000 PGI1YBR196C 1665 nt7.6□□□□□ -1.19
SUB1P54000 PPS1YBR276C 2424 nt7.6□□□□□ -1.19
SUB1P54000 YDR215CYDR215C 414 nt7.6□□□□□ -1.19
SUB1P54000 RRT14YIL127C 621 nt7.6□□□□□ -1.19
SUB1P54000 TPK1YJL164C 1194 nt7.6□□□□□ -1.19
SUB1P54000 CYS4YGR155W 1524 nt7.6□□□□□ -1.19
SUB1P54000 SSC1YJR045C 1965 nt7.6□□□□□ -1.19
SUB1P54000 ATG23YLR431C 1362 nt7.59□□□□□ -1.19
SUB1P54000 NOP7YGR103W 1818 nt7.59□□□□□ -1.19
SUB1P54000 SEC18YBR080C 2277 nt7.59□□□□□ -1.19
SUB1P54000 UTP9YHR196W 1728 nt7.59□□□□□ -1.19
SUB1P54000 REV7YIL139C 738 nt7.59□□□□□ -1.19
SUB1P54000 YKR073CYKR073C 321 nt7.59□□□□□ -1.19
SUB1P54000 YGR210CYGR210C 1236 nt7.58□□□□□ -1.2
SUB1P54000 BNS1YGR230W 414 nt7.58□□□□□ -1.2
SUB1P54000 STP3YLR375W 1032 nt7.58□□□□□ -1.2
SUB1P54000 AVO2YMR068W 1281 nt7.58□□□□□ -1.2
SUB1P54000 PCS60YBR222C 1632 nt7.58□□□□□ -1.2
SUB1P54000 YBR284WYBR284W 2394 nt7.57□□□□□ -1.2
SUB1P54000 FCY2YER056C 1602 nt7.57□□□□□ -1.2
SUB1P54000 TGA1tA(UGC)A 73 nt7.57□□□□□ -1.2
SUB1P54000 tA(UGC)EtA(UGC)E 73 nt7.57□□□□□ -1.2
SUB1P54000 tA(UGC)GtA(UGC)G 73 nt7.57□□□□□ -1.2
SUB1P54000 tA(UGC)LtA(UGC)L 73 nt7.57□□□□□ -1.2
SUB1P54000 tA(UGC)OtA(UGC)O 73 nt7.57□□□□□ -1.2
SUB1P54000 SNF4YGL115W 969 nt7.57□□□□□ -1.2
SUB1P54000 LOT6YLR011W 576 nt7.57□□□□□ -1.2
SUB1P54000 SLD7YOR060C 774 nt7.57□□□□□ -1.2
SUB1P54000 RDR1YOR380W 1641 nt7.56□□□□□ -1.2
SUB1P54000 SRF1YDL133W 1314 nt7.56□□□□□ -1.2
SUB1P54000 YGL260WYGL260W 231 nt7.56□□□□□ -1.2
SUB1P54000 CPR2YHR057C 618 nt7.56□□□□□ -1.2
SUB1P54000 DAL80YKR034W 810 nt7.56□□□□□ -1.2
SUB1P54000 COX17YLL009C 210 nt7.56□□□□□ -1.2
SUB1P54000 YML131WYML131W 1098 nt7.56□□□□□ -1.2
SUB1P54000 BXI1YNL305C 894 nt7.56□□□□□ -1.2
SUB1P54000 YAH1YPL252C 519 nt7.56□□□□□ -1.2
SUB1P54000 SER2YGR208W 930 nt7.55□□□□□ -1.2
SUB1P54000 YKL147CYKL147C 618 nt7.55□□□□□ -1.2
SUB1P54000 DOM34YNL001W 1161 nt7.55□□□□□ -1.2
SUB1P54000 YOR012WYOR012W 414 nt7.55□□□□□ -1.2
SUB1P54000 ADH5YBR145W 1056 nt7.55□□□□□ -1.2
SUB1P54000 ALT2YDR111C 1524 nt7.55□□□□□ -1.2
SUB1P54000 EXG2YDR261C 1689 nt7.54□□□□□ -1.2
SUB1P54000 NUP57YGR119C 1626 nt7.54□□□□□ -1.2
SUB1P54000 YDR327WYDR327W 327 nt7.54□□□□□ -1.2
SUB1P54000 LIP5YOR196C 1245 nt7.54□□□□□ -1.2
SUB1P54000 CDC34YDR054C 888 nt7.53□□□□□ -1.2
SUB1P54000 YML034C-AYML034C-A 399 nt7.53□□□□□ -1.2
SUB1P54000 RPS6AYPL090C 711 nt7.53□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms