Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YLR030WYLR030W 792 nt8.24□□□□□ -1.09
RPT4P53549 LSC1YOR142W 990 nt8.24□□□□□ -1.09
RPT4P53549 DRE2YKR071C 1047 nt8.23□□□□□ -1.09
RPT4P53549 SAL1YNL083W 1485 nt8.23□□□□□ -1.09
RPT4P53549 HNM1YGL077C 1692 nt8.23□□□□□ -1.09
RPT4P53549 RUP1YOR138C 2016 nt8.22□□□□□ -1.09
RPT4P53549 QRI5YLR204W 336 nt8.22□□□□□ -1.09
RPT4P53549 YMR252CYMR252C 405 nt8.22□□□□□ -1.09
RPT4P53549 FYV1YDR024W 486 nt8.2□□□□□ -1.1
RPT4P53549 ERG27YLR100W 1044 nt8.2□□□□□ -1.1
RPT4P53549 NTG2YOL043C 1143 nt8.2□□□□□ -1.1
RPT4P53549 YOL099CYOL099C 492 nt8.2□□□□□ -1.1
RPT4P53549 YLL058WYLL058W 1728 nt8.2□□□□□ -1.1
RPT4P53549 NUP49YGL172W 1419 nt8.2□□□□□ -1.1
RPT4P53549 ASF1YJL115W 840 nt8.19□□□□□ -1.1
RPT4P53549 RTC2YBR147W 891 nt8.19□□□□□ -1.1
RPT4P53549 YDR387CYDR387C 1668 nt8.18□□□□□ -1.1
RPT4P53549 TPI1YDR050C 747 nt8.18□□□□□ -1.1
RPT4P53549 YBL113CYBL113C 2379 nt8.18□□□□□ -1.1
RPT4P53549 PGI1YBR196C 1665 nt8.18□□□□□ -1.1
RPT4P53549 ADE5,7YGL234W 2409 nt8.17□□□□□ -1.1
RPT4P53549 MRPS18YNL306W 654 nt8.17□□□□□ -1.1
RPT4P53549 RSC9YML127W 1746 nt8.17□□□□□ -1.1
RPT4P53549 YGL260WYGL260W 231 nt8.16□□□□□ -1.1
RPT4P53549 FMO1YHR176W 1299 nt8.16□□□□□ -1.1
RPT4P53549 TAF9YMR236W 474 nt8.16□□□□□ -1.1
RPT4P53549 CDC7YDL017W 1524 nt8.15□□□□□ -1.1
RPT4P53549 YIP4YGL198W 708 nt8.15□□□□□ -1.1
RPT4P53549 YBR113WYBR113W 483 nt8.15□□□□□ -1.1
RPT4P53549 TCB1YOR086C 3561 nt8.15□□□□□ -1.1
RPT4P53549 YCR049CYCR049C 447 nt8.14□□□□□ -1.11
RPT4P53549 YDR327WYDR327W 327 nt8.13□□□□□ -1.11
RPT4P53549 YEL075W-AYEL075W-A 612 nt8.13□□□□□ -1.11
RPT4P53549 YLR361C-AYLR361C-A 297 nt8.13□□□□□ -1.11
RPT4P53549 YLR463CYLR463C 552 nt8.13□□□□□ -1.11
RPT4P53549 GCG1YER163C 699 nt8.12□□□□□ -1.11
RPT4P53549 RPL43AYPR043W 279 nt8.12□□□□□ -1.11
RPT4P53549 RSC4YKR008W 1878 nt8.12□□□□□ -1.11
RPT4P53549 MSC3YLR219W 2187 nt8.12□□□□□ -1.11
RPT4P53549 ICP55YER078C 1536 nt8.12□□□□□ -1.11
RPT4P53549 YAL045CYAL045C 309 nt8.11□□□□□ -1.11
RPT4P53549 Q0010Q0010 387 nt8.11□□□□□ -1.11
RPT4P53549 SGF73YGL066W 1974 nt8.11□□□□□ -1.11
RPT4P53549 OSW2YLR054C 2175 nt8.1□□□□□ -1.11
RPT4P53549 YKL147CYKL147C 618 nt8.1□□□□□ -1.11
RPT4P53549 FRA1YLL029W 2250 nt8.1□□□□□ -1.11
RPT4P53549 YDR306CYDR306C 1437 nt8.1□□□□□ -1.11
RPT4P53549 YGL102CYGL102C 429 nt8.09□□□□□ -1.11
RPT4P53549 YLL056CYLL056C 897 nt8.09□□□□□ -1.11
RPT4P53549 CDC1YDR182W 1476 nt8.08□□□□□ -1.12
RPT4P53549 YML018CYML018C 1182 nt8.07□□□□□ -1.12
RPT4P53549 RRP9YPR137W 1722 nt8.06□□□□□ -1.12
RPT4P53549 PRI1YIR008C 1230 nt8.06□□□□□ -1.12
RPT4P53549 YOR072WYOR072W 315 nt8.06□□□□□ -1.12
RPT4P53549 PMT7YDR307W 1989 nt8.06□□□□□ -1.12
RPT4P53549 YKL102CYKL102C 306 nt8.05□□□□□ -1.12
RPT4P53549 TSR2YLR435W 618 nt8.05□□□□□ -1.12
RPT4P53549 MDH2YOL126C 1134 nt8.05□□□□□ -1.12
RPT4P53549 LIP5YOR196C 1245 nt8.05□□□□□ -1.12
RPT4P53549 ERG8YMR220W 1356 nt8.05□□□□□ -1.12
RPT4P53549 ERR1YOR393W 1314 nt8.03□□□□□ -1.12
RPT4P53549 ERR2YPL281C 1314 nt8.03□□□□□ -1.12
RPT4P53549 ADE2YOR128C 1716 nt8.03□□□□□ -1.12
RPT4P53549 YDR187CYDR187C 519 nt8.03□□□□□ -1.12
RPT4P53549 MAM3YOL060C 2121 nt8.03□□□□□ -1.12
RPT4P53549 DUS3YLR401C 2007 nt8.02□□□□□ -1.13
RPT4P53549 OM45YIL136W 1182 nt8.02□□□□□ -1.13
RPT4P53549 REC107YJR021C 945 nt8.02□□□□□ -1.13
RPT4P53549 YNL092WYNL092W 1203 nt8.02□□□□□ -1.13
RPT4P53549 CTA1YDR256C 1548 nt8.02□□□□□ -1.13
RPT4P53549 HPT1YDR399W 666 nt8.01□□□□□ -1.13
RPT4P53549 HIS1YER055C 894 nt8.01□□□□□ -1.13
RPT4P53549 TFG2YGR005C 1203 nt8.01□□□□□ -1.13
RPT4P53549 MED6YHR058C 888 nt8.01□□□□□ -1.13
RPT4P53549 SMX3YPR182W 261 nt8.01□□□□□ -1.13
RPT4P53549 YEL034C-AYEL034C-A 603 nt8□□□□□ -1.13
RPT4P53549 YKL077WYKL077W 1179 nt8□□□□□ -1.13
RPT4P53549 YMR122CYMR122C 375 nt8□□□□□ -1.13
RPT4P53549 GTS1YGL181W 1191 nt7.99□□□□□ -1.13
RPT4P53549 THR1YHR025W 1074 nt7.99□□□□□ -1.13
RPT4P53549 YKR045CYKR045C 552 nt7.99□□□□□ -1.13
RPT4P53549 FSF1YOR271C 984 nt7.99□□□□□ -1.13
RPT4P53549 MRPS28YDR337W 861 nt7.98□□□□□ -1.13
RPT4P53549 TDH2YJR009C 999 nt7.98□□□□□ -1.13
RPT4P53549 YJR154WYJR154W 1041 nt7.98□□□□□ -1.13
RPT4P53549 SPG5YMR191W 1122 nt7.98□□□□□ -1.13
RPT4P53549 TAE1YBR261C 699 nt7.98□□□□□ -1.13
RPT4P53549 MEX67YPL169C 1800 nt7.98□□□□□ -1.13
RPT4P53549 MSS51YLR203C 1311 nt7.98□□□□□ -1.13
RPT4P53549 VBA5YKR105C 1749 nt7.98□□□□□ -1.13
RPT4P53549 MHT1YLL062C 975 nt7.97□□□□□ -1.13
RPT4P53549 YBR027CYBR027C 333 nt7.97□□□□□ -1.13
RPT4P53549 PHO85YPL031C 918 nt7.97□□□□□ -1.13
RPT4P53549 SEC62YPL094C 825 nt7.97□□□□□ -1.13
RPT4P53549 GNA1YFL017C 480 nt7.96□□□□□ -1.14
RPT4P53549 PTC7YHR076W 1032 nt7.96□□□□□ -1.14
RPT4P53549 CUE4YML101C 354 nt7.96□□□□□ -1.14
RPT4P53549 GPD2YOL059W 1323 nt7.96□□□□□ -1.14
RPT4P53549 CUP2YGL166W 678 nt7.95□□□□□ -1.14
RPT4P53549 MSP1YGR028W 1089 nt7.94□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms