Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN2P51788 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN2P51788 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN2P51788 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN2P51788 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN2P51788 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN2P51788 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN2P51788 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.97■■□□□ 1.43
CLCN2P51788 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.97■■□□□ 1.43
CLCN2P51788 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.97■■□□□ 1.43
CLCN2P51788 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L13-201ENST00000554103 1267 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.97■■□□□ 1.43
CLCN2P51788 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.97■■□□□ 1.43
CLCN2P51788 MIR3648-2-201ENST00000581792 180 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L15-201ENST00000611059 1267 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L23-201ENST00000615195 1269 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 MIR3648-1-201ENST00000615959 180 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L24-201ENST00000617576 1269 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L22-201ENST00000618238 1269 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L20-201ENST00000619712 1269 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L21-201ENST00000622058 1269 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L10-201ENST00000622460 1267 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 DUX4L25-201ENST00000624915 1269 ntBASIC23.97■■□□□ 1.43
CLCN2P51788 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.97■■□□□ 1.43
CLCN2P51788 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CLCN2P51788 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN2P51788 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CLCN2P51788 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN2P51788 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN2P51788 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN2P51788 AC093323.1-202ENST00000635031 2045 ntBASIC23.96■■□□□ 1.43
CLCN2P51788 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN2P51788 AC135983.2-203ENST00000454486 1613 ntBASIC23.95■■□□□ 1.43
CLCN2P51788 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
CLCN2P51788 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLCN2P51788 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CLCN2P51788 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.95■■□□□ 1.42
CLCN2P51788 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.95■■□□□ 1.42
CLCN2P51788 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLCN2P51788 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.94■■□□□ 1.42
CLCN2P51788 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCN2P51788 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCN2P51788 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.94■■□□□ 1.42
CLCN2P51788 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.94■■□□□ 1.42
CLCN2P51788 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.94■■□□□ 1.42
CLCN2P51788 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCN2P51788 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLCN2P51788 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLCN2P51788 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCN2P51788 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCN2P51788 CR559946.2-201ENST00000623684 991 ntBASIC23.93■■□□□ 1.42
CLCN2P51788 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.93■■□□□ 1.42
CLCN2P51788 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLCN2P51788 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.93■■□□□ 1.42
CLCN2P51788 AC091060.1-201ENST00000623524 1766 ntBASIC23.93■■□□□ 1.42
CLCN2P51788 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CLCN2P51788 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.92■■□□□ 1.42
CLCN2P51788 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 AC016575.1-201ENST00000607026 382 ntBASIC23.92■■□□□ 1.42
CLCN2P51788 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
CLCN2P51788 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCN2P51788 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.91■■□□□ 1.42
CLCN2P51788 WHAMMP2-203ENST00000563942 1603 ntBASIC23.91■■□□□ 1.42
CLCN2P51788 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CLCN2P51788 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN2P51788 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN2P51788 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN2P51788 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.9■■□□□ 1.42
CLCN2P51788 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN2P51788 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN2P51788 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN2P51788 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CLCN2P51788 AC020928.2-201ENST00000588717 2197 ntBASIC23.89■■□□□ 1.41
CLCN2P51788 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN2P51788 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN2P51788 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN2P51788 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.88■■□□□ 1.41
CLCN2P51788 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.88■■□□□ 1.41
CLCN2P51788 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN2P51788 MIR639-201ENST00000384974 98 ntBASIC23.87■■□□□ 1.41
CLCN2P51788 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CLCN2P51788 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN2P51788 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.86■■□□□ 1.41
CLCN2P51788 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN2P51788 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN2P51788 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.86■■□□□ 1.41
CLCN2P51788 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.86■■□□□ 1.41
CLCN2P51788 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.86■■□□□ 1.41
CLCN2P51788 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.86■■□□□ 1.41
CLCN2P51788 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
CLCN2P51788 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.85■■□□□ 1.41
CLCN2P51788 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN2P51788 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms