Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.05■■■□□ 2.08
CPT1AP50416 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CPT1AP50416 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CPT1AP50416 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CPT1AP50416 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.04■■■□□ 2.08
CPT1AP50416 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
CPT1AP50416 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.04■■■□□ 2.08
CPT1AP50416 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
CPT1AP50416 AL139393.2-201ENST00000608721 2025 ntBASIC28.03■■■□□ 2.08
CPT1AP50416 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.03■■■□□ 2.08
CPT1AP50416 AC025884.2-201ENST00000553429 711 ntBASIC28.03■■■□□ 2.08
CPT1AP50416 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CPT1AP50416 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CPT1AP50416 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
CPT1AP50416 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CPT1AP50416 RARRES2P1-201ENST00000474487 481 ntBASIC28.02■■■□□ 2.08
CPT1AP50416 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
CPT1AP50416 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CPT1AP50416 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CPT1AP50416 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.01■■■□□ 2.07
CPT1AP50416 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CPT1AP50416 AC026202.3-201ENST00000600805 1127 ntBASIC28.01■■■□□ 2.07
CPT1AP50416 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.01■■■□□ 2.07
CPT1AP50416 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.01■■■□□ 2.07
CPT1AP50416 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
CPT1AP50416 ABCB10P3-201ENST00000561950 2166 ntBASIC28■■■□□ 2.07
CPT1AP50416 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CPT1AP50416 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPT1AP50416 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPT1AP50416 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPT1AP50416 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPT1AP50416 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPT1AP50416 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CPT1AP50416 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CPT1AP50416 DUX4L18-201ENST00000553347 1267 ntBASIC27.99■■■□□ 2.07
CPT1AP50416 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CPT1AP50416 RP9P-202ENST00000450133 1212 ntBASIC27.98■■■□□ 2.07
CPT1AP50416 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.98■■■□□ 2.07
CPT1AP50416 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CPT1AP50416 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CPT1AP50416 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CPT1AP50416 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CPT1AP50416 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
CPT1AP50416 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.97■■■□□ 2.07
CPT1AP50416 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
CPT1AP50416 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CPT1AP50416 AP002414.2-202ENST00000590929 1450 ntBASIC27.96■■■□□ 2.07
CPT1AP50416 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.95■■■□□ 2.07
CPT1AP50416 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.95■■■□□ 2.06
CPT1AP50416 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CPT1AP50416 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.95■■■□□ 2.06
CPT1AP50416 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
CPT1AP50416 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
CPT1AP50416 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
CPT1AP50416 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
CPT1AP50416 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.94■■■□□ 2.06
CPT1AP50416 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CPT1AP50416 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.94■■■□□ 2.06
CPT1AP50416 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.93■■■□□ 2.06
CPT1AP50416 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.93■■■□□ 2.06
CPT1AP50416 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CPT1AP50416 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.92■■■□□ 2.06
CPT1AP50416 AC093536.1-201ENST00000569153 554 ntBASIC27.92■■■□□ 2.06
CPT1AP50416 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.91■■■□□ 2.06
CPT1AP50416 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CPT1AP50416 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CPT1AP50416 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.9■■■□□ 2.06
CPT1AP50416 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
CPT1AP50416 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CPT1AP50416 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
CPT1AP50416 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
CPT1AP50416 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
CPT1AP50416 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.89■■■□□ 2.06
CPT1AP50416 MIR3960-201ENST00000583311 91 ntBASIC27.89■■■□□ 2.06
CPT1AP50416 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CPT1AP50416 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CPT1AP50416 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.88■■■□□ 2.05
CPT1AP50416 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.88■■■□□ 2.05
CPT1AP50416 RAP2CP1-202ENST00000605179 643 ntBASIC27.88■■■□□ 2.05
CPT1AP50416 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CPT1AP50416 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.87■■■□□ 2.05
CPT1AP50416 DUX4L9-201ENST00000449051 1259 ntBASIC27.87■■■□□ 2.05
CPT1AP50416 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
CPT1AP50416 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.87■■■□□ 2.05
CPT1AP50416 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
CPT1AP50416 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.86■■■□□ 2.05
CPT1AP50416 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
CPT1AP50416 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
CPT1AP50416 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.84■■■□□ 2.05
CPT1AP50416 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CPT1AP50416 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.84■■■□□ 2.05
CPT1AP50416 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CPT1AP50416 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CPT1AP50416 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.83■■■□□ 2.05
CPT1AP50416 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CPT1AP50416 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
CPT1AP50416 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.82■■■□□ 2.04
CPT1AP50416 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.82■■■□□ 2.04
CPT1AP50416 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
CPT1AP50416 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms