Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.57■■□□□ 1.36
CDKN2CP42773 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDKN2CP42773 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDKN2CP42773 AC044849.2-201ENST00000606596 710 ntBASIC23.56■■□□□ 1.36
CDKN2CP42773 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDKN2CP42773 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDKN2CP42773 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.55■■□□□ 1.36
CDKN2CP42773 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDKN2CP42773 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.55■■□□□ 1.36
CDKN2CP42773 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKN2CP42773 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.54■■□□□ 1.36
CDKN2CP42773 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDKN2CP42773 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDKN2CP42773 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CDKN2CP42773 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.53■■□□□ 1.36
CDKN2CP42773 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CDKN2CP42773 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.53■■□□□ 1.36
CDKN2CP42773 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDKN2CP42773 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CDKN2CP42773 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDKN2CP42773 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDKN2CP42773 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDKN2CP42773 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDKN2CP42773 AC021231.2-201ENST00000594613 730 ntBASIC23.51■■□□□ 1.35
CDKN2CP42773 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDKN2CP42773 AP004609.3-201ENST00000610705 1884 ntBASIC23.51■■□□□ 1.35
CDKN2CP42773 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.5■■□□□ 1.35
CDKN2CP42773 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDKN2CP42773 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDKN2CP42773 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.5■■□□□ 1.35
CDKN2CP42773 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.5■■□□□ 1.35
CDKN2CP42773 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDKN2CP42773 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CDKN2CP42773 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDKN2CP42773 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.49■■□□□ 1.35
CDKN2CP42773 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CDKN2CP42773 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.49■■□□□ 1.35
CDKN2CP42773 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.49■■□□□ 1.35
CDKN2CP42773 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.48■■□□□ 1.35
CDKN2CP42773 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CDKN2CP42773 AC135731.1-201ENST00000569415 2548 ntBASIC23.48■■□□□ 1.35
CDKN2CP42773 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDKN2CP42773 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDKN2CP42773 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDKN2CP42773 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDKN2CP42773 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDKN2CP42773 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDKN2CP42773 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.47■■□□□ 1.35
CDKN2CP42773 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.47■■□□□ 1.35
CDKN2CP42773 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDKN2CP42773 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDKN2CP42773 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.46■■□□□ 1.35
CDKN2CP42773 AC145676.1-201ENST00000514988 2004 ntBASIC23.46■■□□□ 1.35
CDKN2CP42773 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDKN2CP42773 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDKN2CP42773 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.45■■□□□ 1.34
CDKN2CP42773 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDKN2CP42773 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDKN2CP42773 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CDKN2CP42773 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDKN2CP42773 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDKN2CP42773 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
CDKN2CP42773 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.44■■□□□ 1.34
CDKN2CP42773 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDKN2CP42773 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDKN2CP42773 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDKN2CP42773 DUX4L29-201ENST00000425409 679 ntBASIC23.41■■□□□ 1.34
CDKN2CP42773 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDKN2CP42773 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.4■■□□□ 1.34
CDKN2CP42773 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.4■■□□□ 1.34
CDKN2CP42773 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDKN2CP42773 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CDKN2CP42773 AC092803.2-201ENST00000564287 1899 ntBASIC23.39■■□□□ 1.34
CDKN2CP42773 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDKN2CP42773 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDKN2CP42773 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.38■■□□□ 1.33
CDKN2CP42773 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDKN2CP42773 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.38■■□□□ 1.33
CDKN2CP42773 WHAMMP3-201ENST00000611636 1609 ntBASIC23.38■■□□□ 1.33
CDKN2CP42773 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDKN2CP42773 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.38■■□□□ 1.33
CDKN2CP42773 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDKN2CP42773 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDKN2CP42773 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDKN2CP42773 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.38■■□□□ 1.33
CDKN2CP42773 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDKN2CP42773 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDKN2CP42773 AC142472.1-201ENST00000612013 1741 ntBASIC23.37■■□□□ 1.33
CDKN2CP42773 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDKN2CP42773 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDKN2CP42773 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2CP42773 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.36■■□□□ 1.33
CDKN2CP42773 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2CP42773 DUSP8P4-201ENST00000399538 1761 ntBASIC23.35■■□□□ 1.33
CDKN2CP42773 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDKN2CP42773 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDKN2CP42773 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDKN2CP42773 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CDKN2CP42773 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDKN2CP42773 AC020928.2-201ENST00000588717 2197 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms