Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	VPS65	YLR322W	315 nt		5.88	□□□□□ -1.47
VMA11	P32842	CAR2	YLR438W	1275 nt		5.88	□□□□□ -1.47
VMA11	P32842	SML1	YML058W	315 nt		5.88	□□□□□ -1.47
VMA11	P32842	Q0010	Q0010	387 nt		5.87	□□□□□ -1.47
VMA11	P32842	MPH3	YJR160C	1809 nt		5.87	□□□□□ -1.47
VMA11	P32842	CIT2	YCR005C	1383 nt		5.86	□□□□□ -1.47
VMA11	P32842	ERG10	YPL028W	1197 nt		5.86	□□□□□ -1.47
VMA11	P32842	BIO3	YNR058W	1443 nt		5.85	□□□□□ -1.47
VMA11	P32842	SNF7	YLR025W	723 nt		5.85	□□□□□ -1.47
VMA11	P32842	YLR162W	YLR162W	357 nt		5.85	□□□□□ -1.47
VMA11	P32842	PRP2	YNR011C	2631 nt		5.85	□□□□□ -1.47
VMA11	P32842	ADE17	YMR120C	1779 nt		5.85	□□□□□ -1.47
VMA11	P32842	TUB1	YML085C	1344 nt		5.84	□□□□□ -1.47
VMA11	P32842	SRY1	YKL218C	981 nt		5.84	□□□□□ -1.47
VMA11	P32842	RTC4	YNL254C	1206 nt		5.84	□□□□□ -1.47
VMA11	P32842	RCF2	YNR018W	675 nt		5.84	□□□□□ -1.47
VMA11	P32842	MET13	YGL125W	1803 nt		5.83	□□□□□ -1.48
VMA11	P32842	YPR130C	YPR130C	408 nt		5.83	□□□□□ -1.48
VMA11	P32842	PDC5	YLR134W	1692 nt		5.82	□□□□□ -1.48
VMA11	P32842	LDB7	YBL006C	543 nt		5.82	□□□□□ -1.48
VMA11	P32842	DPM1	YPR183W	804 nt		5.82	□□□□□ -1.48
VMA11	P32842	YCL049C	YCL049C	939 nt		5.82	□□□□□ -1.48
VMA11	P32842	LEO1	YOR123C	1395 nt		5.81	□□□□□ -1.48
VMA11	P32842	GET4	YOR164C	939 nt		5.81	□□□□□ -1.48
VMA11	P32842	PPS1	YBR276C	2424 nt		5.8	□□□□□ -1.48
VMA11	P32842	BNA3	YJL060W	1335 nt		5.8	□□□□□ -1.48
VMA11	P32842	YAH1	YPL252C	519 nt		5.8	□□□□□ -1.48
VMA11	P32842	SGE1	YPR198W	1632 nt		5.8	□□□□□ -1.48
VMA11	P32842	NMD5	YJR132W	3147 nt		5.8	□□□□□ -1.48
VMA11	P32842	MPE1	YKL059C	1326 nt		5.79	□□□□□ -1.48
VMA11	P32842	ERG12	YMR208W	1332 nt		5.79	□□□□□ -1.48
VMA11	P32842	SSC1	YJR045C	1965 nt		5.79	□□□□□ -1.48
VMA11	P32842	YOL046C	YOL046C	675 nt		5.79	□□□□□ -1.48
VMA11	P32842	YOR389W	YOR389W	1875 nt		5.79	□□□□□ -1.48
VMA11	P32842	ERG24	YNL280C	1317 nt		5.78	□□□□□ -1.48
VMA11	P32842	PET117	YER058W	324 nt		5.78	□□□□□ -1.48
VMA11	P32842	YER137C	YER137C	447 nt		5.78	□□□□□ -1.48
VMA11	P32842	YNR001W-A	YNR001W-A	219 nt		5.78	□□□□□ -1.48
VMA11	P32842	RUP1	YOR138C	2016 nt		5.78	□□□□□ -1.48
VMA11	P32842	YJL163C	YJL163C	1668 nt		5.78	□□□□□ -1.48
VMA11	P32842	CYS4	YGR155W	1524 nt		5.78	□□□□□ -1.48
VMA11	P32842	RSC9	YML127W	1746 nt		5.77	□□□□□ -1.49
VMA11	P32842	CIA1	YDR267C	993 nt		5.77	□□□□□ -1.49
VMA11	P32842	YGR068W-A	YGR068W-A	96 nt		5.77	□□□□□ -1.49
VMA11	P32842	SNA3	YJL151C	402 nt		5.77	□□□□□ -1.49
VMA11	P32842	AFG3	YER017C	2286 nt		5.77	□□□□□ -1.49
VMA11	P32842	ASN2	YGR124W	1719 nt		5.77	□□□□□ -1.49
VMA11	P32842	FCY22	YER060W-A	1593 nt		5.76	□□□□□ -1.49
VMA11	P32842	YJR154W	YJR154W	1041 nt		5.76	□□□□□ -1.49
VMA11	P32842	PLB2	YMR006C	2121 nt		5.76	□□□□□ -1.49
VMA11	P32842	RTC2	YBR147W	891 nt		5.76	□□□□□ -1.49
VMA11	P32842	YOS9	YDR057W	1629 nt		5.76	□□□□□ -1.49
VMA11	P32842	COX15	YER141W	1461 nt		5.76	□□□□□ -1.49
VMA11	P32842	PMP3	YDR276C	168 nt		5.75	□□□□□ -1.49
VMA11	P32842	YIP4	YGL198W	708 nt		5.75	□□□□□ -1.49
VMA11	P32842	HTZ1	YOL012C	405 nt		5.75	□□□□□ -1.49
VMA11	P32842	SUF3	tG(CCC)D	72 nt		5.74	□□□□□ -1.49
VMA11	P32842	POR2	YIL114C	846 nt		5.74	□□□□□ -1.49
VMA11	P32842	HOC1	YJR075W	1191 nt		5.74	□□□□□ -1.49
VMA11	P32842	HNM1	YGL077C	1692 nt		5.73	□□□□□ -1.49
VMA11	P32842	APE4	YHR113W	1473 nt		5.73	□□□□□ -1.49
VMA11	P32842	TPI1	YDR050C	747 nt		5.73	□□□□□ -1.49
VMA11	P32842	LIA1	YJR070C	978 nt		5.73	□□□□□ -1.49
VMA11	P32842	FIT2	YOR382W	462 nt		5.73	□□□□□ -1.49
VMA11	P32842	YPR076W	YPR076W	375 nt		5.73	□□□□□ -1.49
VMA11	P32842	YDR327W	YDR327W	327 nt		5.72	□□□□□ -1.49
VMA11	P32842	SUN4	YNL066W	1263 nt		5.72	□□□□□ -1.49
VMA11	P32842	SGF73	YGL066W	1974 nt		5.72	□□□□□ -1.49
VMA11	P32842	TCB1	YOR086C	3561 nt		5.71	□□□□□ -1.49
VMA11	P32842	DMC1	YER179W	1005 nt		5.71	□□□□□ -1.5
VMA11	P32842	YMR074C	YMR074C	438 nt		5.71	□□□□□ -1.5
VMA11	P32842	YBL113C	YBL113C	2379 nt		5.71	□□□□□ -1.5
VMA11	P32842	BRN1	YBL097W	2265 nt		5.71	□□□□□ -1.5
VMA11	P32842	RDR1	YOR380W	1641 nt		5.7	□□□□□ -1.5
VMA11	P32842	ECM30	YLR436C	3825 nt		5.7	□□□□□ -1.5
VMA11	P32842	GPD1	YDL022W	1176 nt		5.7	□□□□□ -1.5
VMA11	P32842	PPH21	YDL134C	1110 nt		5.7	□□□□□ -1.5
VMA11	P32842	AGX1	YFL030W	1158 nt		5.7	□□□□□ -1.5
VMA11	P32842	MEU1	YLR017W	1014 nt		5.7	□□□□□ -1.5
VMA11	P32842	YNR005C	YNR005C	405 nt		5.7	□□□□□ -1.5
VMA11	P32842	YGL260W	YGL260W	231 nt		5.69	□□□□□ -1.5
VMA11	P32842	AIM20	YIL158W	615 nt		5.69	□□□□□ -1.5
VMA11	P32842	GAL83	YER027C	1254 nt		5.68	□□□□□ -1.5
VMA11	P32842	ASR1	YPR093C	867 nt		5.68	□□□□□ -1.5
VMA11	P32842	DAL7	YIR031C	1665 nt		5.68	□□□□□ -1.5
VMA11	P32842	YKL147C	YKL147C	618 nt		5.67	□□□□□ -1.5
VMA11	P32842	ERG27	YLR100W	1044 nt		5.67	□□□□□ -1.5
VMA11	P32842	RPL43A	YPR043W	279 nt		5.67	□□□□□ -1.5
VMA11	P32842	EMP65	YER140W	1671 nt		5.66	□□□□□ -1.5
VMA11	P32842	CDC7	YDL017W	1524 nt		5.66	□□□□□ -1.5
VMA11	P32842	OPI7	YDR360W	435 nt		5.66	□□□□□ -1.5
VMA11	P32842	SPG1	YGR236C	288 nt		5.66	□□□□□ -1.5
VMA11	P32842	MGM101	YJR144W	810 nt		5.66	□□□□□ -1.5
VMA11	P32842	FMP40	YPL222W	2067 nt		5.66	□□□□□ -1.5
VMA11	P32842	PGI1	YBR196C	1665 nt		5.66	□□□□□ -1.5
VMA11	P32842	VBA5	YKR105C	1749 nt		5.65	□□□□□ -1.5
VMA11	P32842	ECM27	YJR106W	2178 nt		5.65	□□□□□ -1.5
VMA11	P32842	YKR018C	YKR018C	2178 nt		5.65	□□□□□ -1.5
VMA11	P32842	MRPL35	YDR322W	1104 nt		5.65	□□□□□ -1.5
VMA11	P32842	TPK1	YJL164C	1194 nt		5.65	□□□□□ -1.5

Retrieved 100 of 7,029 protein–RNA pairs in 45.6 ms