Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 AL449106.1-201ENST00000608517 1980 ntBASIC21.09■□□□□ 0.97
ZNF728P0DKX0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.09■□□□□ 0.97
ZNF728P0DKX0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF728P0DKX0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF728P0DKX0 LINC01971-201ENST00000617888 1048 ntBASIC21.08■□□□□ 0.97
ZNF728P0DKX0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF728P0DKX0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF728P0DKX0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF728P0DKX0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF728P0DKX0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF728P0DKX0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ZNF728P0DKX0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF728P0DKX0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF728P0DKX0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF728P0DKX0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.06■□□□□ 0.96
ZNF728P0DKX0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF728P0DKX0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF728P0DKX0 AP002414.2-202ENST00000590929 1450 ntBASIC21.06■□□□□ 0.96
ZNF728P0DKX0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF728P0DKX0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF728P0DKX0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF728P0DKX0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF728P0DKX0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF728P0DKX0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF728P0DKX0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZNF728P0DKX0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF728P0DKX0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF728P0DKX0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF728P0DKX0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF728P0DKX0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF728P0DKX0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF728P0DKX0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF728P0DKX0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF728P0DKX0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF728P0DKX0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ZNF728P0DKX0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF728P0DKX0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF728P0DKX0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF728P0DKX0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF728P0DKX0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF728P0DKX0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF728P0DKX0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21■□□□□ 0.95
ZNF728P0DKX0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF728P0DKX0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ZNF728P0DKX0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF728P0DKX0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF728P0DKX0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF728P0DKX0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF728P0DKX0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF728P0DKX0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.98■□□□□ 0.95
ZNF728P0DKX0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF728P0DKX0 DUX4L11-201ENST00000611504 1267 ntBASIC20.98■□□□□ 0.95
ZNF728P0DKX0 DUX4L12-201ENST00000614593 1267 ntBASIC20.98■□□□□ 0.95
ZNF728P0DKX0 DUX4L14-201ENST00000621227 1267 ntBASIC20.98■□□□□ 0.95
ZNF728P0DKX0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF728P0DKX0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF728P0DKX0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF728P0DKX0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF728P0DKX0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF728P0DKX0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF728P0DKX0 AC091060.1-201ENST00000623524 1766 ntBASIC20.97■□□□□ 0.95
ZNF728P0DKX0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF728P0DKX0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF728P0DKX0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF728P0DKX0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZNF728P0DKX0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF728P0DKX0 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF728P0DKX0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF728P0DKX0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF728P0DKX0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF728P0DKX0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF728P0DKX0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF728P0DKX0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF728P0DKX0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF728P0DKX0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L13-201ENST00000554103 1267 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L15-201ENST00000611059 1267 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L23-201ENST00000615195 1269 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L24-201ENST00000617576 1269 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L22-201ENST00000618238 1269 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L20-201ENST00000619712 1269 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L21-201ENST00000622058 1269 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L10-201ENST00000622460 1267 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 DUX4L25-201ENST00000624915 1269 ntBASIC20.94■□□□□ 0.94
ZNF728P0DKX0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF728P0DKX0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF728P0DKX0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF728P0DKX0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF728P0DKX0 AC110285.7-201ENST00000624417 1536 ntBASIC20.93■□□□□ 0.94
ZNF728P0DKX0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF728P0DKX0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF728P0DKX0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF728P0DKX0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF728P0DKX0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF728P0DKX0 MIR7108-201ENST00000614319 87 ntBASIC20.92■□□□□ 0.94
ZNF728P0DKX0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF728P0DKX0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF728P0DKX0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF728P0DKX0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.91■□□□□ 0.94
ZNF728P0DKX0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms