Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHGBP05060 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHGBP05060 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
CHGBP05060 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.29■■■□□ 2.44
CHGBP05060 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CHGBP05060 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.28■■■□□ 2.44
CHGBP05060 LINC01003-201ENST00000564834 1764 ntBASIC30.28■■■□□ 2.44
CHGBP05060 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHGBP05060 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHGBP05060 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
CHGBP05060 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHGBP05060 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CHGBP05060 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHGBP05060 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CHGBP05060 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
CHGBP05060 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHGBP05060 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
CHGBP05060 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHGBP05060 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHGBP05060 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHGBP05060 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHGBP05060 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CHGBP05060 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CHGBP05060 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CHGBP05060 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.23■■■□□ 2.43
CHGBP05060 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.23■■■□□ 2.43
CHGBP05060 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
CHGBP05060 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHGBP05060 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHGBP05060 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CHGBP05060 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.22■■■□□ 2.43
CHGBP05060 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.22■■■□□ 2.43
CHGBP05060 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHGBP05060 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.21■■■□□ 2.43
CHGBP05060 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGBP05060 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGBP05060 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
CHGBP05060 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.2■■■□□ 2.43
CHGBP05060 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHGBP05060 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHGBP05060 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHGBP05060 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHGBP05060 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.19■■■□□ 2.42
CHGBP05060 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CHGBP05060 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.18■■■□□ 2.42
CHGBP05060 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHGBP05060 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHGBP05060 HSD17B1P1-201ENST00000590052 955 ntBASIC30.17■■■□□ 2.42
CHGBP05060 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CHGBP05060 BX255925.1-201ENST00000566954 1854 ntBASIC30.16■■■□□ 2.42
CHGBP05060 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.16■■■□□ 2.42
CHGBP05060 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.16■■■□□ 2.42
CHGBP05060 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.16■■■□□ 2.42
CHGBP05060 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGBP05060 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGBP05060 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
CHGBP05060 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGBP05060 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGBP05060 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHGBP05060 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
CHGBP05060 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHGBP05060 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHGBP05060 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHGBP05060 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHGBP05060 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CHGBP05060 AC060814.1-201ENST00000554326 538 ntBASIC30.12■■■□□ 2.41
CHGBP05060 GPX1-201ENST00000419349 1106 ntBASIC30.11■■■□□ 2.41
CHGBP05060 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.11■■■□□ 2.41
CHGBP05060 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHGBP05060 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHGBP05060 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHGBP05060 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHGBP05060 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CHGBP05060 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.1■■■□□ 2.41
CHGBP05060 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CHGBP05060 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHGBP05060 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHGBP05060 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHGBP05060 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CHGBP05060 AC022413.1-201ENST00000624602 984 ntBASIC30.09■■■□□ 2.41
CHGBP05060 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CHGBP05060 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHGBP05060 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHGBP05060 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.07■■■□□ 2.4
CHGBP05060 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHGBP05060 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHGBP05060 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
CHGBP05060 AL359258.2-201ENST00000564063 1566 ntBASIC30.05■■■□□ 2.4
CHGBP05060 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHGBP05060 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.04■■■□□ 2.4
CHGBP05060 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CHGBP05060 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
CHGBP05060 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.04■■■□□ 2.4
CHGBP05060 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CHGBP05060 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CHGBP05060 AL157400.5-201ENST00000507624 621 ntBASIC30.03■■■□□ 2.4
CHGBP05060 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.03■■■□□ 2.4
CHGBP05060 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.03■■■□□ 2.4
CHGBP05060 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.03■■■□□ 2.4
CHGBP05060 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.03■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms