Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 BHLHE23-202ENST00000612929 1109 ntBASIC28.58■■■□□ 2.17
HMGCRP04035 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.58■■■□□ 2.17
HMGCRP04035 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HMGCRP04035 AC010980.1-201ENST00000587192 1142 ntBASIC28.57■■■□□ 2.16
HMGCRP04035 AC019069.1-201ENST00000610008 1333 ntBASIC28.57■■■□□ 2.16
HMGCRP04035 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.57■■■□□ 2.16
HMGCRP04035 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HMGCRP04035 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.57■■■□□ 2.16
HMGCRP04035 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
HMGCRP04035 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
HMGCRP04035 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
HMGCRP04035 AC074183.2-201ENST00000623112 922 ntBASIC28.56■■■□□ 2.16
HMGCRP04035 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HMGCRP04035 AL359258.2-201ENST00000564063 1566 ntBASIC28.55■■■□□ 2.16
HMGCRP04035 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
HMGCRP04035 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
HMGCRP04035 AC025884.2-201ENST00000553429 711 ntBASIC28.54■■■□□ 2.16
HMGCRP04035 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.54■■■□□ 2.16
HMGCRP04035 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.54■■■□□ 2.16
HMGCRP04035 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.54■■■□□ 2.16
HMGCRP04035 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
HMGCRP04035 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
HMGCRP04035 KRT8P33-201ENST00000508125 1423 ntBASIC28.53■■■□□ 2.16
HMGCRP04035 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.53■■■□□ 2.16
HMGCRP04035 AC009299.2-201ENST00000482477 511 ntBASIC28.53■■■□□ 2.16
HMGCRP04035 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
HMGCRP04035 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HMGCRP04035 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HMGCRP04035 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.52■■■□□ 2.16
HMGCRP04035 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.52■■■□□ 2.16
HMGCRP04035 RP9P-202ENST00000450133 1212 ntBASIC28.52■■■□□ 2.16
HMGCRP04035 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.52■■■□□ 2.16
HMGCRP04035 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.52■■■□□ 2.16
HMGCRP04035 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.52■■■□□ 2.16
HMGCRP04035 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HMGCRP04035 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HMGCRP04035 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HMGCRP04035 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.51■■■□□ 2.15
HMGCRP04035 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
HMGCRP04035 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HMGCRP04035 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.5■■■□□ 2.15
HMGCRP04035 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
HMGCRP04035 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
HMGCRP04035 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.5■■■□□ 2.15
HMGCRP04035 AC093536.1-201ENST00000569153 554 ntBASIC28.49■■■□□ 2.15
HMGCRP04035 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
HMGCRP04035 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.48■■■□□ 2.15
HMGCRP04035 RAP2CP1-202ENST00000605179 643 ntBASIC28.48■■■□□ 2.15
HMGCRP04035 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
HMGCRP04035 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.48■■■□□ 2.15
HMGCRP04035 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
HMGCRP04035 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HMGCRP04035 SPCS2P3-201ENST00000500401 656 ntBASIC28.47■■■□□ 2.15
HMGCRP04035 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HMGCRP04035 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HMGCRP04035 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HMGCRP04035 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HMGCRP04035 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
HMGCRP04035 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
HMGCRP04035 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.46■■■□□ 2.15
HMGCRP04035 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
HMGCRP04035 AC139795.1-202ENST00000500444 432 ntBASIC28.46■■■□□ 2.15
HMGCRP04035 AC131212.1-201ENST00000613771 668 ntBASIC28.46■■■□□ 2.15
HMGCRP04035 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
HMGCRP04035 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
HMGCRP04035 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
HMGCRP04035 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
HMGCRP04035 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
HMGCRP04035 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.45■■■□□ 2.15
HMGCRP04035 YBX1P4-201ENST00000392794 808 ntBASIC28.45■■■□□ 2.14
HMGCRP04035 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.45■■■□□ 2.14
HMGCRP04035 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.45■■■□□ 2.14
HMGCRP04035 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.45■■■□□ 2.14
HMGCRP04035 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
HMGCRP04035 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
HMGCRP04035 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
HMGCRP04035 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
HMGCRP04035 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.44■■■□□ 2.14
HMGCRP04035 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.44■■■□□ 2.14
HMGCRP04035 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.44■■■□□ 2.14
HMGCRP04035 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
HMGCRP04035 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HMGCRP04035 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.43■■■□□ 2.14
HMGCRP04035 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
HMGCRP04035 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.43■■■□□ 2.14
HMGCRP04035 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
HMGCRP04035 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.42■■■□□ 2.14
HMGCRP04035 MIR6765-201ENST00000614092 87 ntBASIC28.42■■■□□ 2.14
HMGCRP04035 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
HMGCRP04035 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.41■■■□□ 2.14
HMGCRP04035 AC103834.1-201ENST00000520383 144 ntBASIC28.41■■■□□ 2.14
HMGCRP04035 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.41■■■□□ 2.14
HMGCRP04035 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.4■■■□□ 2.14
HMGCRP04035 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.4■■■□□ 2.14
HMGCRP04035 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
HMGCRP04035 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HMGCRP04035 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.4■■■□□ 2.14
HMGCRP04035 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
HMGCRP04035 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HMGCRP04035 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms