Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CTNND1O60716 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CTNND1O60716 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CTNND1O60716 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
CTNND1O60716 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CTNND1O60716 AL592293.1-201ENST00000502889 1188 ntBASIC29.51■■■□□ 2.31
CTNND1O60716 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.5■■■□□ 2.31
CTNND1O60716 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.5■■■□□ 2.31
CTNND1O60716 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CTNND1O60716 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CTNND1O60716 AC025884.2-201ENST00000553429 711 ntBASIC29.49■■■□□ 2.31
CTNND1O60716 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CTNND1O60716 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CTNND1O60716 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CTNND1O60716 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CTNND1O60716 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CTNND1O60716 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CTNND1O60716 AL139393.2-201ENST00000608721 2025 ntBASIC29.47■■■□□ 2.31
CTNND1O60716 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.47■■■□□ 2.31
CTNND1O60716 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CTNND1O60716 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.47■■■□□ 2.31
CTNND1O60716 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.46■■■□□ 2.31
CTNND1O60716 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CTNND1O60716 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.46■■■□□ 2.31
CTNND1O60716 RARRES2P1-201ENST00000474487 481 ntBASIC29.46■■■□□ 2.31
CTNND1O60716 AC026202.3-201ENST00000600805 1127 ntBASIC29.46■■■□□ 2.31
CTNND1O60716 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CTNND1O60716 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CTNND1O60716 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.45■■■□□ 2.31
CTNND1O60716 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CTNND1O60716 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
CTNND1O60716 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.44■■■□□ 2.3
CTNND1O60716 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CTNND1O60716 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CTNND1O60716 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CTNND1O60716 DUX4L18-201ENST00000553347 1267 ntBASIC29.43■■■□□ 2.3
CTNND1O60716 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.43■■■□□ 2.3
CTNND1O60716 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.43■■■□□ 2.3
CTNND1O60716 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.42■■■□□ 2.3
CTNND1O60716 ABCB10P3-201ENST00000561950 2166 ntBASIC29.42■■■□□ 2.3
CTNND1O60716 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.42■■■□□ 2.3
CTNND1O60716 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.42■■■□□ 2.3
CTNND1O60716 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CTNND1O60716 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CTNND1O60716 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CTNND1O60716 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CTNND1O60716 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
CTNND1O60716 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.41■■■□□ 2.3
CTNND1O60716 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CTNND1O60716 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.41■■■□□ 2.3
CTNND1O60716 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CTNND1O60716 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CTNND1O60716 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CTNND1O60716 RP9P-202ENST00000450133 1212 ntBASIC29.39■■■□□ 2.3
CTNND1O60716 AP002414.2-202ENST00000590929 1450 ntBASIC29.39■■■□□ 2.3
CTNND1O60716 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CTNND1O60716 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.38■■■□□ 2.29
CTNND1O60716 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CTNND1O60716 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CTNND1O60716 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.38■■■□□ 2.29
CTNND1O60716 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CTNND1O60716 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CTNND1O60716 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CTNND1O60716 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.37■■■□□ 2.29
CTNND1O60716 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.37■■■□□ 2.29
CTNND1O60716 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CTNND1O60716 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CTNND1O60716 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.36■■■□□ 2.29
CTNND1O60716 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CTNND1O60716 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
CTNND1O60716 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.36■■■□□ 2.29
CTNND1O60716 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CTNND1O60716 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CTNND1O60716 RAP2CP1-202ENST00000605179 643 ntBASIC29.35■■■□□ 2.29
CTNND1O60716 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
CTNND1O60716 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.35■■■□□ 2.29
CTNND1O60716 AC093536.1-201ENST00000569153 554 ntBASIC29.34■■■□□ 2.29
CTNND1O60716 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.34■■■□□ 2.29
CTNND1O60716 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.34■■■□□ 2.29
CTNND1O60716 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
CTNND1O60716 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CTNND1O60716 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CTNND1O60716 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CTNND1O60716 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
CTNND1O60716 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CTNND1O60716 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CTNND1O60716 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.32■■■□□ 2.28
CTNND1O60716 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.32■■■□□ 2.28
CTNND1O60716 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.31■■■□□ 2.28
CTNND1O60716 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.31■■■□□ 2.28
CTNND1O60716 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.31■■■□□ 2.28
CTNND1O60716 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CTNND1O60716 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CTNND1O60716 DUX4L9-201ENST00000449051 1259 ntBASIC29.3■■■□□ 2.28
CTNND1O60716 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CTNND1O60716 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.3■■■□□ 2.28
CTNND1O60716 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
CTNND1O60716 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
CTNND1O60716 MIR3960-201ENST00000583311 91 ntBASIC29.29■■■□□ 2.28
CTNND1O60716 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms