Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ZC3H12DA2A288 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ZC3H12DA2A288 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZC3H12DA2A288 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZC3H12DA2A288 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZC3H12DA2A288 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.75■■□□□ 1.23
ZC3H12DA2A288 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.75■■□□□ 1.23
ZC3H12DA2A288 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.74■■□□□ 1.23
ZC3H12DA2A288 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ZC3H12DA2A288 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.74■■□□□ 1.23
ZC3H12DA2A288 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZC3H12DA2A288 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ZC3H12DA2A288 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZC3H12DA2A288 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.73■■□□□ 1.23
ZC3H12DA2A288 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZC3H12DA2A288 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
ZC3H12DA2A288 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZC3H12DA2A288 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZC3H12DA2A288 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.72■■□□□ 1.23
ZC3H12DA2A288 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.72■■□□□ 1.23
ZC3H12DA2A288 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ZC3H12DA2A288 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.71■■□□□ 1.23
ZC3H12DA2A288 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.71■■□□□ 1.23
ZC3H12DA2A288 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.71■■□□□ 1.23
ZC3H12DA2A288 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.71■■□□□ 1.23
ZC3H12DA2A288 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ZC3H12DA2A288 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.71■■□□□ 1.23
ZC3H12DA2A288 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
ZC3H12DA2A288 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H12DA2A288 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
ZC3H12DA2A288 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
ZC3H12DA2A288 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H12DA2A288 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H12DA2A288 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.69■■□□□ 1.22
ZC3H12DA2A288 CR559946.2-201ENST00000623684 991 ntBASIC22.69■■□□□ 1.22
ZC3H12DA2A288 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ZC3H12DA2A288 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H12DA2A288 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H12DA2A288 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H12DA2A288 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H12DA2A288 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H12DA2A288 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3H12DA2A288 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
ZC3H12DA2A288 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 MIR7108-201ENST00000614319 87 ntBASIC22.67■■□□□ 1.22
ZC3H12DA2A288 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H12DA2A288 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZC3H12DA2A288 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZC3H12DA2A288 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZC3H12DA2A288 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZC3H12DA2A288 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ZC3H12DA2A288 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.65■■□□□ 1.22
ZC3H12DA2A288 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ZC3H12DA2A288 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.65■■□□□ 1.22
ZC3H12DA2A288 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZC3H12DA2A288 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZC3H12DA2A288 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZC3H12DA2A288 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
ZC3H12DA2A288 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZC3H12DA2A288 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
ZC3H12DA2A288 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
ZC3H12DA2A288 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.63■■□□□ 1.21
ZC3H12DA2A288 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3H12DA2A288 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3H12DA2A288 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3H12DA2A288 MIR3648-2-201ENST00000581792 180 ntBASIC22.63■■□□□ 1.21
ZC3H12DA2A288 MIR3648-1-201ENST00000615959 180 ntBASIC22.63■■□□□ 1.21
ZC3H12DA2A288 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.63■■□□□ 1.21
ZC3H12DA2A288 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.63■■□□□ 1.21
ZC3H12DA2A288 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H12DA2A288 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ZC3H12DA2A288 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ZC3H12DA2A288 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.62■■□□□ 1.21
ZC3H12DA2A288 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ZC3H12DA2A288 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
ZC3H12DA2A288 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.61■■□□□ 1.21
ZC3H12DA2A288 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 AC016575.1-201ENST00000607026 382 ntBASIC22.6■■□□□ 1.21
ZC3H12DA2A288 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.6■■□□□ 1.21
ZC3H12DA2A288 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H12DA2A288 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H12DA2A288 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H12DA2A288 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
ZC3H12DA2A288 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H12DA2A288 AL449106.1-201ENST00000608517 1980 ntBASIC22.58■■□□□ 1.21
ZC3H12DA2A288 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H12DA2A288 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
ZC3H12DA2A288 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.58■■□□□ 1.21
ZC3H12DA2A288 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H12DA2A288 HLA-V-202ENST00000446817 847 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms