Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SMIM35A0A1B0GVV1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.62■■■□□ 2.01
SMIM35A0A1B0GVV1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.62■■■□□ 2.01
SMIM35A0A1B0GVV1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SMIM35A0A1B0GVV1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.61■■■□□ 2.01
SMIM35A0A1B0GVV1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMIM35A0A1B0GVV1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMIM35A0A1B0GVV1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.61■■■□□ 2.01
SMIM35A0A1B0GVV1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.61■■■□□ 2.01
SMIM35A0A1B0GVV1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
SMIM35A0A1B0GVV1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
SMIM35A0A1B0GVV1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMIM35A0A1B0GVV1 KRT18P60-201ENST00000312876 1297 ntBASIC27.6■■■□□ 2.01
SMIM35A0A1B0GVV1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SMIM35A0A1B0GVV1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMIM35A0A1B0GVV1 SMPD5-203ENST00000639008 1464 ntBASIC27.59■■■□□ 2.01
SMIM35A0A1B0GVV1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMIM35A0A1B0GVV1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SMIM35A0A1B0GVV1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SMIM35A0A1B0GVV1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.58■■■□□ 2.01
SMIM35A0A1B0GVV1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.58■■■□□ 2.01
SMIM35A0A1B0GVV1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
SMIM35A0A1B0GVV1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.57■■■□□ 2
SMIM35A0A1B0GVV1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.57■■■□□ 2
SMIM35A0A1B0GVV1 AL033527.3-201ENST00000566366 1196 ntBASIC27.56■■■□□ 2
SMIM35A0A1B0GVV1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SMIM35A0A1B0GVV1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.55■■■□□ 2
SMIM35A0A1B0GVV1 AC025884.2-201ENST00000553429 711 ntBASIC27.55■■■□□ 2
SMIM35A0A1B0GVV1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SMIM35A0A1B0GVV1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SMIM35A0A1B0GVV1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SMIM35A0A1B0GVV1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SMIM35A0A1B0GVV1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.53■■■□□ 2
SMIM35A0A1B0GVV1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.53■■■□□ 2
SMIM35A0A1B0GVV1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SMIM35A0A1B0GVV1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SMIM35A0A1B0GVV1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
SMIM35A0A1B0GVV1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMIM35A0A1B0GVV1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.52■■■□□ 2
SMIM35A0A1B0GVV1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMIM35A0A1B0GVV1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMIM35A0A1B0GVV1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
SMIM35A0A1B0GVV1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.51■■■□□ 2
SMIM35A0A1B0GVV1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMIM35A0A1B0GVV1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SMIM35A0A1B0GVV1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.51■■□□□ 1.99
SMIM35A0A1B0GVV1 AC004987.1-201ENST00000428627 508 ntBASIC27.51■■□□□ 1.99
SMIM35A0A1B0GVV1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.51■■□□□ 1.99
SMIM35A0A1B0GVV1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMIM35A0A1B0GVV1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 TSPY13P-201ENST00000338964 914 ntBASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMIM35A0A1B0GVV1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
SMIM35A0A1B0GVV1 AC009831.1-201ENST00000580420 1582 ntBASIC27.49■■□□□ 1.99
SMIM35A0A1B0GVV1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMIM35A0A1B0GVV1 ATP5G2P3-201ENST00000429083 425 ntBASIC27.49■■□□□ 1.99
SMIM35A0A1B0GVV1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.49■■□□□ 1.99
SMIM35A0A1B0GVV1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 AC133552.2-201ENST00000619106 1032 ntBASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMIM35A0A1B0GVV1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
SMIM35A0A1B0GVV1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
SMIM35A0A1B0GVV1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.47■■□□□ 1.99
SMIM35A0A1B0GVV1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMIM35A0A1B0GVV1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SMIM35A0A1B0GVV1 AC026202.3-201ENST00000600805 1127 ntBASIC27.46■■□□□ 1.99
SMIM35A0A1B0GVV1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SMIM35A0A1B0GVV1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMIM35A0A1B0GVV1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMIM35A0A1B0GVV1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
SMIM35A0A1B0GVV1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMIM35A0A1B0GVV1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMIM35A0A1B0GVV1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.45■■□□□ 1.98
SMIM35A0A1B0GVV1 AL592293.1-201ENST00000502889 1188 ntBASIC27.45■■□□□ 1.98
SMIM35A0A1B0GVV1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
SMIM35A0A1B0GVV1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMIM35A0A1B0GVV1 RP9P-202ENST00000450133 1212 ntBASIC27.44■■□□□ 1.98
SMIM35A0A1B0GVV1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMIM35A0A1B0GVV1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMIM35A0A1B0GVV1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMIM35A0A1B0GVV1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
SMIM35A0A1B0GVV1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SMIM35A0A1B0GVV1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SMIM35A0A1B0GVV1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
SMIM35A0A1B0GVV1 AC129492.7-201ENST00000622992 756 ntBASIC27.43■■□□□ 1.98
SMIM35A0A1B0GVV1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMIM35A0A1B0GVV1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMIM35A0A1B0GVV1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.42■■□□□ 1.98
SMIM35A0A1B0GVV1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SMIM35A0A1B0GVV1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.41■■□□□ 1.98
SMIM35A0A1B0GVV1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms