Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 DUX4L21-201ENST00000622058 1269 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L10-201ENST00000622460 1267 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L25-201ENST00000624915 1269 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 BX255925.1-201ENST00000566954 1854 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 AC018358.1-201ENST00000631079 1402 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV9A0A0B4J1U6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV9A0A0B4J1U6 LINC01003-201ENST00000564834 1764 ntBASIC19.74■□□□□ 0.75
TRBV9A0A0B4J1U6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV9A0A0B4J1U6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRBV9A0A0B4J1U6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV9A0A0B4J1U6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV9A0A0B4J1U6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV9A0A0B4J1U6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRBV9A0A0B4J1U6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV9A0A0B4J1U6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV9A0A0B4J1U6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.72■□□□□ 0.75
TRBV9A0A0B4J1U6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV9A0A0B4J1U6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV9A0A0B4J1U6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRBV9A0A0B4J1U6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV9A0A0B4J1U6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV9A0A0B4J1U6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV9A0A0B4J1U6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV9A0A0B4J1U6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV9A0A0B4J1U6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV9A0A0B4J1U6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV9A0A0B4J1U6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV9A0A0B4J1U6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV9A0A0B4J1U6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.68■□□□□ 0.74
TRBV9A0A0B4J1U6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV9A0A0B4J1U6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV9A0A0B4J1U6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TRBV9A0A0B4J1U6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV9A0A0B4J1U6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV9A0A0B4J1U6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV9A0A0B4J1U6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.66■□□□□ 0.74
TRBV9A0A0B4J1U6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV9A0A0B4J1U6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV9A0A0B4J1U6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRBV9A0A0B4J1U6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV9A0A0B4J1U6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV9A0A0B4J1U6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 AC008813.1-201ENST00000536597 885 ntBASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 CR559946.2-201ENST00000623684 991 ntBASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV9A0A0B4J1U6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRBV9A0A0B4J1U6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV9A0A0B4J1U6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV9A0A0B4J1U6 MIR3648-2-201ENST00000581792 180 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms