Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 AL109659.2-201ENST00000606809 1674 ntBASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DRB4X5D2U9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 MTMR9LP-203ENST00000426597 1545 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 ANO7L1-203ENST00000602586 1720 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 AC104581.1-202ENST00000635932 2618 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 AL390955.1-201ENST00000428694 934 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 MCCD1P1-208ENST00000445732 328 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 BICD1-207ENST00000551848 1962 ntBASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
HLA-DRB4X5D2U9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
HLA-DRB4X5D2U9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HLA-DRB4X5D2U9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.9□□□□□ -0.19
HLA-DRB4X5D2U9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 OR6D1P-202ENST00000641007 5290 ntBASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 AL596275.1-201ENST00000423464 877 ntBASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 TSPY17P-201ENST00000450329 467 ntBASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 AC008622.2-201ENST00000617006 1229 ntBASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 AL133373.2-201ENST00000623187 2828 ntBASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DRB4X5D2U9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 AL023284.2-201ENST00000405850 579 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms