Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 AC066615.1-201ENST00000640911 628 ntBASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 AL135905.2-201ENST00000584934 1404 ntBASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4B1Q9Y6B7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 RARRES2P10-201ENST00000564312 460 ntBASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4B1Q9Y6B7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP4B1Q9Y6B7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP4B1Q9Y6B7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 MIR718-201ENST00000390190 70 ntBASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 AC008550.1-201ENST00000511500 884 ntBASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4B1Q9Y6B7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms