Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 LINC01711-201ENST00000598340 967 ntBASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 TPSP2-201ENST00000561760 610 ntBASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 AC012615.1-201ENST00000565797 1299 ntBASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 AL109659.2-201ENST00000606809 1674 ntBASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 AC005082.1-201ENST00000413042 2259 ntBASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA9Q9Y5G4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 HOXB1-202ENST00000577092 1414 ntBASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA9Q9Y5G4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.21■□□□□ 0.34
PCDHGA9Q9Y5G4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA9Q9Y5G4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PCDHGA9Q9Y5G4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 AC091304.2-201ENST00000564639 760 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms