Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 AP000593.1-201ENST00000393668 712 ntBASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 MIR4674-201ENST00000582457 87 ntBASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 AC034236.2-201ENST00000606662 1610 ntBASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 AC112907.2-201ENST00000448639 330 ntBASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 AC012313.10-201ENST00000623509 926 ntBASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB1Q9Y5F3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 AL499627.1-201ENST00000569373 2188 ntBASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 AC126763.1-201ENST00000552015 2118 ntBASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 AC083849.1-201ENST00000615227 514 ntBASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB1Q9Y5F3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms